RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TMEM134Q9H6X4 195 aa13.51□□□□□ -0.25
LTBR-204ENST00000444814 FAM105AQ9NUU6 356 aa13.51□□□□□ -0.25
LTBR-204ENST00000444814 MTMR10Q9NXD2 777 aa13.51□□□□□ -0.25
LTBR-204ENST00000444814 KANSL3Q9P2N6 904 aa13.51□□□□□ -0.25
LTBR-204ENST00000444814 RCOR1Q9UKL0 485 aa13.51□□□□□ -0.25
LTBR-204ENST00000444814 LINC01553A4QN01 128 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 GOLGA6L4A6NEF3 574 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 ZNF623O75123 536 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 PRKCBP05771 671 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 FGFR4P22455 802 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 PEX3P56589 373 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 ERVK-21P61565 698 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 TAP1Q03518 808 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 MBTD1Q05BQ5 628 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 DHX8Q14562 1220 aaKnown RBP13.5□□□□□ -0.25
LTBR-204ENST00000444814 PTPROQ16827 1216 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 NAALADL2Q58DX5 795 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 RTN4RL1Q86UN2 441 aaPredicted RBP13.5□□□□□ -0.25
LTBR-204ENST00000444814 LRRC43Q8N309 656 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 LINC01599Q8WXQ3 324 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 CLIC6Q96NY7 704 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 C11orf84Q9BUA3 381 aaPredicted RBP13.5□□□□□ -0.25
LTBR-204ENST00000444814 RUSC1Q9BVN2 902 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 PARVGQ9HBI0 331 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 PCDHB12Q9Y5F1 795 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 ARID2Q68CP9 1835 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 MICAL3Q7RTP6 2002 aa13.5□□□□□ -0.25
LTBR-204ENST00000444814 COL4A6Q14031 1691 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 TBKBP1A7MCY6 615 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 ACKR2O00590 384 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 MGEA5O60502 916 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 TSPAN1O60635 241 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 CSDE1O75534 798 aaKnown RBP13.49□□□□□ -0.25
LTBR-204ENST00000444814 MYOGP15173 224 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 FOSL2P15408 326 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 GAP43P17677 238 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 LAG3P18627 525 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 PKP1Q13835 747 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 DCAF4L1Q3SXM0 396 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 SPECC1Q5M775 1068 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 SLC27A1Q6PCB7 646 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 STXBP4Q6ZWJ1 553 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 KCNK18Q7Z418 384 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 CEP57L1Q8IYX8 460 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 FBXO22Q8NEZ5 403 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 ARNTL2Q8WYA1 636 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 FAM161BQ96MY7 647 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 MRPL4Q9BYD3 311 aaKnown RBP13.49□□□□□ -0.25
LTBR-204ENST00000444814 ZHX3Q9H4I2 956 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 SEL1LQ9UBV2 794 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 USP25Q9UHP3 1055 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 STXBP5LQ9Y2K9 1186 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 PCDHB2Q9Y5E7 798 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 TET1Q8NFU7 2136 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 ITGA4P13612 1032 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 LIG1P18858 919 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 NPTX2P47972 431 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 GRIN1Q05586 938 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 MCM6Q14566 821 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 BMS1Q14692 1282 aaKnown RBP13.49□□□□□ -0.25
LTBR-204ENST00000444814 TMCO2Q7Z6W1 182 aaPredicted RBP13.49□□□□□ -0.25
LTBR-204ENST00000444814 MYCT1Q8N699 235 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 ZNF689Q96CS4 500 aaPredicted RBP13.49□□□□□ -0.25
LTBR-204ENST00000444814 NTPCRQ9BSD7 190 aaKnown RBP13.49□□□□□ -0.25
LTBR-204ENST00000444814 TNMDQ9H2S6 317 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 TTYH1Q9H313 450 aaPredicted RBP13.49□□□□□ -0.25
LTBR-204ENST00000444814 FZD8Q9H461 694 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 LMCD1Q9NZU5 365 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 STK39Q9UEW8 545 aa13.49□□□□□ -0.25
LTBR-204ENST00000444814 ZMYM2Q9UBW7 1377 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 A0A1B0GUA9 196 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 NR1I2O75469 434 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 CTNNB1P35222 781 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 PPM1AP35813 382 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 ALCAMQ13740 583 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 ADALQ6DHV7 355 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 Q7L0L9 218 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 FAM178BQ8IXR5 827 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 CCDC65Q8IXS2 484 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 TMEM192Q8IY95 271 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 PPP2R3CQ969Q6 453 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 FAM193BQ96PV7 902 aaPredicted RBP13.48□□□□□ -0.25
LTBR-204ENST00000444814 CDX2Q99626 313 aaPredicted RBP13.48□□□□□ -0.25
LTBR-204ENST00000444814 REEP2Q9BRK0 252 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 LMAN2LQ9H0V9 348 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 MINDY3Q9H8M7 445 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 BLOC1S4Q9NUP1 217 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 PCDHA7Q9UN72 937 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 SIP14410 1827 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 DNAH12Q6ZR08 3092 aa13.48□□□□□ -0.25
LTBR-204ENST00000444814 MAPTP10636 758 aaKnown RBP13.47□□□□□ -0.25
LTBR-204ENST00000444814 ARF4P18085 180 aaPredicted RBP13.47□□□□□ -0.25
LTBR-204ENST00000444814 BMPR1AP36894 532 aa13.47□□□□□ -0.25
LTBR-204ENST00000444814 RNASELQ05823 741 aaKnown RBP13.47□□□□□ -0.25
LTBR-204ENST00000444814 RAD51AP2Q09MP3 1159 aa13.47□□□□□ -0.25
LTBR-204ENST00000444814 GRIN2CQ14957 1233 aa13.47□□□□□ -0.25
LTBR-204ENST00000444814 KYAT1Q16773 422 aa13.47□□□□□ -0.25
LTBR-204ENST00000444814 PAN2Q504Q3 1202 aaKnown RBP13.47□□□□□ -0.25
LTBR-204ENST00000444814 ATF7IP2Q5U623 682 aa13.47□□□□□ -0.25
LTBR-204ENST00000444814 PDILTQ8N807 584 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms