RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 OATP04181 439 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 CYP27A1Q02318 531 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 CENPUQ71F23 418 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 CATSPER4Q7RTX7 472 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 ADGRA1Q86SQ6 560 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 ARAP2Q8WZ64 1704 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 IDI2Q9BXS1 227 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 ABCA3Q99758 1704 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 FGGP02679 453 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 STAT5BP51692 787 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 OAZ1P54368 228 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 ANGEL2Q5VTE6 544 aaKnown RBP12.35□□□□□ -0.43
PTCH1-208ENST00000430669 ABT1Q9ULW3 272 aaKnown RBP12.35□□□□□ -0.43
PTCH1-208ENST00000430669 EVI5O60447 810 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 NPM3O75607 178 aaKnown RBP12.35□□□□□ -0.43
PTCH1-208ENST00000430669 MAPTP10636 758 aaKnown RBP12.35□□□□□ -0.43
PTCH1-208ENST00000430669 TOB1P50616 345 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-208ENST00000430669 IRX4P78413 519 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 CATSPER3Q86XQ3 398 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 ZNF564Q8TBZ8 553 aaPredicted RBP12.35□□□□□ -0.43
PTCH1-208ENST00000430669 TMEM8AQ9HCN3 771 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 RPLP2P05387 115 aaKnown RBP12.35□□□□□ -0.43
PTCH1-208ENST00000430669 CASP8Q14790 479 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 TMEM270Q6UE05 265 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 NIPA1Q7RTP0 329 aa12.35□□□□□ -0.43
PTCH1-208ENST00000430669 CNOT8Q9UFF9 292 aaKnown RBP12.35□□□□□ -0.43
PTCH1-208ENST00000430669 C4BP0C0L5 1744 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 FOXN1O15353 648 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 CPP00450 1065 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 ZFXP17010 805 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-208ENST00000430669 C7orf31Q8N865 590 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 LRFN2Q9ULH4 789 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 ZRANB2O95218 330 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTCH1-208ENST00000430669 BACE1P56817 501 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 STILQ15468 1287 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 MAP3K21Q5TCX8 1036 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 ADAT2Q7Z6V5 191 aaKnown RBP12.34□□□□□ -0.43
PTCH1-208ENST00000430669 ANKRD13AQ8IZ07 590 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 URGCPQ8TCY9 931 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 MYH14Q7Z406 1995 aaKnown RBP12.34□□□□□ -0.43
PTCH1-208ENST00000430669 GOLGA8IPA6NC78 632 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 GOLGA8JA6NMD2 632 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 TEX33O43247 280 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 GNGT1P63211 74 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 RNF169Q8NCN4 708 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 PFDN4Q9NQP4 134 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 DPEP1P16444 411 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 MCUR1Q96AQ8 359 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 RGL1Q9NZL6 768 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 CICQ96RK0 1608 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-208ENST00000430669 FAM187AA6NFU0 413 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 SUN1O94901 812 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 KPNA2P52292 529 aaKnown RBP12.34□□□□□ -0.43
PTCH1-208ENST00000430669 SNRNP35Q16560 246 aaKnown RBP12.34□□□□□ -0.43
PTCH1-208ENST00000430669 ANKRD20A3Q5VUR7 823 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 GSDMBQ8TAX9 411 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 APOL6Q9BWW8 343 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 TRPV6Q9H1D0 765 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 SEPT10Q9P0V9 454 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 UVRAGQ9P2Y5 699 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 MORC2Q9Y6X9 1032 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-208ENST00000430669 GAKO14976 1311 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 CETPP11597 493 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-208ENST00000430669 CCZ1BP86790 482 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 CCZ1P86791 482 aaPredicted RBP12.34□□□□□ -0.43
PTCH1-208ENST00000430669 ZNF560Q96MR9 790 aa12.34□□□□□ -0.43
PTCH1-208ENST00000430669 EXTL3O43909 919 aa12.33□□□□□ -0.43
PTCH1-208ENST00000430669 PPP2R5CQ13362 524 aa12.33□□□□□ -0.43
PTCH1-208ENST00000430669 DARS2Q6PI48 645 aaKnown RBP12.33□□□□□ -0.43
PTCH1-208ENST00000430669 TRAPPC11Q7Z392 1133 aa12.33□□□□□ -0.43
PTCH1-208ENST00000430669 CTAGE3PQ8IX95 158 aa12.33□□□□□ -0.43
PTCH1-208ENST00000430669 SCYL3Q8IZE3 742 aa12.33□□□□□ -0.43
PTCH1-208ENST00000430669 RSRC1Q96IZ7 334 aaKnown RBP12.33□□□□□ -0.43
PTCH1-208ENST00000430669 TTLL3Q9Y4R7 772 aa12.33□□□□□ -0.43
PTCH1-208ENST00000430669 HUS1O60921 280 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 TAF1P21675 1872 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 ADARB2Q9NS39 739 aaKnown RBP12.33□□□□□ -0.44
PTCH1-208ENST00000430669 KCNH7Q9NS40 1196 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 ERAP1Q9NZ08 941 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 ROBO3Q96MS0 1386 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 CD58P19256 250 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 ASPHQ12797 758 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 CYFIP1Q7L576 1253 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 DNERQ8NFT8 737 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 LRRC8CQ8TDW0 803 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 FAM205CA6NFA0 338 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 MYL3P08590 195 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 ARID5BQ14865 1188 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 PKN1Q16512 942 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 KLC2Q9H0B6 622 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 ATP8A1Q9Y2Q0 1164 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 GTPBP10A4D1E9 387 aaKnown RBP12.33□□□□□ -0.44
PTCH1-208ENST00000430669 SPDYE2Q495Y8 402 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 AGPAT1Q99943 283 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 INTS9Q9NV88 658 aaKnown RBP12.33□□□□□ -0.44
PTCH1-208ENST00000430669 LAMC2Q13753 1193 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 FIGNQ5HY92 759 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 VSIG1Q86XK7 387 aa12.33□□□□□ -0.44
PTCH1-208ENST00000430669 RHOT1Q8IXI2 618 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms