RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 ITGA4P13612 1032 aa13.39□□□□□ -0.27
TTC3-208ENST00000428693 TFDP1Q14186 410 aa13.39□□□□□ -0.27
TTC3-208ENST00000428693 CBX2Q14781 532 aaPredicted RBP13.39□□□□□ -0.27
TTC3-208ENST00000428693 CES5AQ6NT32 575 aa13.39□□□□□ -0.27
TTC3-208ENST00000428693 ZNF280BQ86YH2 543 aa13.39□□□□□ -0.27
TTC3-208ENST00000428693 MRPL43Q8N983 215 aaKnown RBP13.39□□□□□ -0.27
TTC3-208ENST00000428693 PIGOQ8TEQ8 1089 aa13.39□□□□□ -0.27
TTC3-208ENST00000428693 CASP10Q92851 521 aa13.39□□□□□ -0.27
TTC3-208ENST00000428693 TNFRSF25Q93038 417 aa13.39□□□□□ -0.27
TTC3-208ENST00000428693 CPB2Q96IY4 423 aa13.39□□□□□ -0.27
TTC3-208ENST00000428693 TRIM6Q9C030 488 aaPredicted RBP13.39□□□□□ -0.27
TTC3-208ENST00000428693 RSAD1Q9HA92 442 aa13.39□□□□□ -0.27
TTC3-208ENST00000428693 DNAJB4Q9UDY4 337 aa13.39□□□□□ -0.27
TTC3-208ENST00000428693 HCFC2Q9Y5Z7 792 aa13.39□□□□□ -0.27
TTC3-208ENST00000428693 USO1O60763 962 aaKnown RBP13.38□□□□□ -0.27
TTC3-208ENST00000428693 CLASP2O75122 1294 aaKnown RBP13.38□□□□□ -0.27
TTC3-208ENST00000428693 GALTP07902 379 aa13.38□□□□□ -0.27
TTC3-208ENST00000428693 SLC11A1P49279 550 aa13.38□□□□□ -0.27
TTC3-208ENST00000428693 SPIRE1Q08AE8 756 aa13.38□□□□□ -0.27
TTC3-208ENST00000428693 MXD4Q14582 209 aaPredicted RBP13.38□□□□□ -0.27
TTC3-208ENST00000428693 TMEM132AQ24JP5 1023 aa13.38□□□□□ -0.27
TTC3-208ENST00000428693 TPRNQ4KMQ1 711 aa13.38□□□□□ -0.27
TTC3-208ENST00000428693 HERC4Q5GLZ8 1057 aaPredicted RBP13.38□□□□□ -0.27
TTC3-208ENST00000428693 RARS2Q5T160 578 aaKnown RBP13.38□□□□□ -0.27
TTC3-208ENST00000428693 HFE2Q6ZVN8 426 aa13.38□□□□□ -0.27
TTC3-208ENST00000428693 TMEM173Q86WV6 379 aaPredicted RBP13.38□□□□□ -0.27
TTC3-208ENST00000428693 IGSF21Q96ID5 467 aa13.38□□□□□ -0.27
TTC3-208ENST00000428693 C8orf76Q96K31 380 aa13.38□□□□□ -0.27
TTC3-208ENST00000428693 TRAIPQ9BWF2 469 aa13.38□□□□□ -0.27
TTC3-208ENST00000428693 CDH22Q9UJ99 828 aa13.38□□□□□ -0.27
TTC3-208ENST00000428693 TRIOO75962 3097 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 POTEMA6NI47 508 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 LOC730098B7Z3J9 87 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 WNT7AO00755 349 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 ZNF623O75123 536 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 DGAT1O75907 488 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 WEE2P0C1S8 567 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 HOXB8P17481 243 aaPredicted RBP13.37□□□□□ -0.27
TTC3-208ENST00000428693 HOXA11P31270 313 aaPredicted RBP13.37□□□□□ -0.27
TTC3-208ENST00000428693 OR1G1P47890 313 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 AFF1P51825 1210 aaKnown RBP13.37□□□□□ -0.27
TTC3-208ENST00000428693 ZNF174Q15697 407 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 NOTUMQ6P988 496 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 SYCE2Q6PIF2 218 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 AGMOQ6ZNB7 445 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 DDX53Q86TM3 631 aaKnown RBP13.37□□□□□ -0.27
TTC3-208ENST00000428693 C12orf76Q8N812 135 aaPredicted RBP13.37□□□□□ -0.27
TTC3-208ENST00000428693 FAM184AQ8NB25 1140 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 ASAP3Q8TDY4 903 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 BCL7CQ8WUZ0 217 aaPredicted RBP13.37□□□□□ -0.27
TTC3-208ENST00000428693 EDAQ92838 391 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 EIF2AQ9BY44 585 aaKnown RBP13.37□□□□□ -0.27
TTC3-208ENST00000428693 POLR3FQ9H1D9 316 aaPredicted RBP13.37□□□□□ -0.27
TTC3-208ENST00000428693 LIMCH1Q9UPQ0 1083 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 FAN1Q9Y2M0 1017 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 PRG3Q9Y2Y8 225 aaPredicted RBP13.37□□□□□ -0.27
TTC3-208ENST00000428693 HES2Q9Y543 173 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 MUC6Q6W4X9 2439 aa13.37□□□□□ -0.27
TTC3-208ENST00000428693 CARNS1A5YM72 827 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 LRRIQ4A6NIV6 560 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 C2CD2LO14523 706 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 TSPAN1O60635 241 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 DDHD2O94830 711 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 ALDH2P05091 517 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 CENPBP07199 599 aaPredicted RBP13.36□□□□□ -0.27
TTC3-208ENST00000428693 EPCAMP16422 314 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 LIG1P18858 919 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 KLRC2P26717 231 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 UBXN11Q5T124 520 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 KANK3Q6NY19 840 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 TMEM184AQ6ZMB5 413 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 CDR2LQ86X02 465 aaPredicted RBP13.36□□□□□ -0.27
TTC3-208ENST00000428693 RSPH1Q8WYR4 309 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 SUSD6Q92537 303 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 PBXIP1Q96AQ6 731 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 MFSD14AQ96MC6 490 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 HSD17B14Q9BPX1 270 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 ZBP1Q9H171 429 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 S1PR5Q9H228 398 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 TMEM60Q9H2L4 133 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 XPNPEP1Q9NQW7 623 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 ANKEF1Q9NU02 776 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 KANSL3Q9P2N6 904 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 IPPQ9Y573 584 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 CNTNAP2Q9UHC6 1331 aa13.36□□□□□ -0.27
TTC3-208ENST00000428693 ARID2Q68CP9 1835 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 B4GALT3O60512 393 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 MYBP10242 640 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 CTSAP10619 480 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
TTC3-208ENST00000428693 AXLP30530 894 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 MLH1P40692 756 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 RARRES1P49788 294 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 PTENP60484 403 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 CAPSQ13938 189 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 KCNC3Q14003 757 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 GIT2Q14161 759 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 TRIM67Q6ZTA4 783 aa13.35□□□□□ -0.27
TTC3-208ENST00000428693 MRPL10Q7Z7H8 261 aaKnown RBP13.35□□□□□ -0.27
TTC3-208ENST00000428693 CABP7Q86V35 215 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms