RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ARL2P36404 184 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 RARRES1P49788 294 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 PTENP60484 403 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 CAPSQ13938 189 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 NBR1Q14596 966 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 SMC1AQ14683 1233 aaKnown RBP10.32□□□□□ -0.76
NUP50-206ENST00000422489 RABEP1Q15276 862 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 SMAD2Q15796 467 aaKnown RBP10.32□□□□□ -0.76
NUP50-206ENST00000422489 UBXN11Q5T124 520 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 MCTP1Q6DN14 999 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 AGMOQ6ZNB7 445 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 MRPL10Q7Z7H8 261 aaKnown RBP10.32□□□□□ -0.76
NUP50-206ENST00000422489 ZNF280BQ86YH2 543 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 NOSTRINQ8IVI9 506 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 VPS52Q8N1B4 723 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 MRPL43Q8N983 215 aaKnown RBP10.32□□□□□ -0.76
NUP50-206ENST00000422489 CDCA3Q99618 268 aaPredicted RBP10.32□□□□□ -0.76
NUP50-206ENST00000422489 LRFN3Q9BTN0 628 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 EIF2AQ9BY44 585 aaKnown RBP10.32□□□□□ -0.76
NUP50-206ENST00000422489 RSAD1Q9HA92 442 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 POLD4Q9HCU8 107 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 TUFT1Q9NNX1 390 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 GPRC5CQ9NQ84 441 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 TBC1D13Q9NVG8 400 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 DNAJB4Q9UDY4 337 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 FAN1Q9Y2M0 1017 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 TTC3P53804 2025 aa10.32□□□□□ -0.76
NUP50-206ENST00000422489 LRRIQ4A6NIV6 560 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 TSPAN1O60635 241 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 DDHD2O94830 711 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 GLP2RO95838 553 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 SSBP05455 408 aaKnown RBP eCLIP10.31□□□□□ -0.76
NUP50-206ENST00000422489 CCT6AP40227 531 aaKnown RBP10.31□□□□□ -0.76
NUP50-206ENST00000422489 SLC11A1P49279 550 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 AFF1P51825 1210 aaKnown RBP10.31□□□□□ -0.76
NUP50-206ENST00000422489 ZP2Q05996 745 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 COASYQ13057 564 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 TMEM132AQ24JP5 1023 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 CDR2LQ86X02 465 aaPredicted RBP10.31□□□□□ -0.76
NUP50-206ENST00000422489 CNNM3Q8NE01 707 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 VN1R2Q8NFZ6 395 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 AUTS2Q8WXX7 1259 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 RPGRIP1Q96KN7 1286 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 POP1Q99575 1024 aaKnown RBP10.31□□□□□ -0.76
NUP50-206ENST00000422489 POLR3CQ9BUI4 534 aaPredicted RBP10.31□□□□□ -0.76
NUP50-206ENST00000422489 TRIM6Q9C030 488 aaPredicted RBP10.31□□□□□ -0.76
NUP50-206ENST00000422489 UBN1Q9NPG3 1134 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 KANSL3Q9P2N6 904 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 LRWD1Q9UFC0 647 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 USP15Q9Y4E8 981 aaPredicted RBP10.31□□□□□ -0.76
NUP50-206ENST00000422489 HES2Q9Y543 173 aa10.31□□□□□ -0.76
NUP50-206ENST00000422489 TCF20Q9UGU0 1960 aaKnown RBP10.31□□□□□ -0.76
NUP50-206ENST00000422489 FSD2A1L4K1 749 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 C2orf71A6NGG8 1288 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 C19orf67A6NJJ6 358 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 B4GALT5O43286 388 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 DCXO43602 365 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 CLASP2O75122 1294 aaKnown RBP10.3□□□□□ -0.76
NUP50-206ENST00000422489 NPTXRO95502 500 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 EYA4O95677 639 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 NCLP19338 710 aaKnown RBP10.3□□□□□ -0.76
NUP50-206ENST00000422489 RPA1P27694 616 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 AXLP30530 894 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 OR1G1P47890 313 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 TRAPPC10P48553 1259 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 MBTD1Q05BQ5 628 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 POU5F1BQ06416 359 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 PTGDRQ13258 359 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 ORC2Q13416 577 aaPredicted RBP10.3□□□□□ -0.76
NUP50-206ENST00000422489 ANKRD54Q6NXT1 300 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 NOTUMQ6P988 496 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 POTEGQ6S5H5 508 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 PADI6Q6TGC4 694 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 DDX53Q86TM3 631 aaKnown RBP10.3□□□□□ -0.76
NUP50-206ENST00000422489 TMEM173Q86WV6 379 aaPredicted RBP10.3□□□□□ -0.76
NUP50-206ENST00000422489 HACE1Q8IYU2 909 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 C4orf32Q8N8J7 132 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 SMG8Q8ND04 991 aaKnown RBP10.3□□□□□ -0.76
NUP50-206ENST00000422489 MCPH1Q8NEM0 835 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 RSPH1Q8WYR4 309 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 IGSF21Q96ID5 467 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 GAD1Q99259 594 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 CSRNP2Q9H175 543 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 PARP2Q9UGN5 583 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 DBR1Q9UK59 544 aaKnown RBP10.3□□□□□ -0.76
NUP50-206ENST00000422489 KIAA1024Q9UPX6 916 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 SSUH2Q9Y2M2 353 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 KIF3AQ9Y496 699 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 IPPQ9Y573 584 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 CNTNAP2Q9UHC6 1331 aa10.3□□□□□ -0.76
NUP50-206ENST00000422489 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.29□□□□□ -0.76
NUP50-206ENST00000422489 CARNS1A5YM72 827 aa10.29□□□□□ -0.76
NUP50-206ENST00000422489 H3BQV1 296 aa10.29□□□□□ -0.76
NUP50-206ENST00000422489 NRP1O14786 923 aa10.29□□□□□ -0.76
NUP50-206ENST00000422489 GPR37L1O60883 481 aa10.29□□□□□ -0.76
NUP50-206ENST00000422489 ARF4P18085 180 aaPredicted RBP10.29□□□□□ -0.76
NUP50-206ENST00000422489 CYP11B2P19099 503 aa10.29□□□□□ -0.76
NUP50-206ENST00000422489 AKAP5P24588 427 aa10.29□□□□□ -0.76
NUP50-206ENST00000422489 U2AF2P26368 475 aaKnown RBP eCLIP10.29□□□□□ -0.76
NUP50-206ENST00000422489 PCBP1Q15365 356 aaKnown RBP eCLIP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms