RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 SAFBQ15424 915 aaKnown RBP eCLIP10.52□□□□□ -0.73
NUP50-205ENST00000419387 LONRF3Q496Y0 759 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 NOMO2Q5JPE7 1267 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 GLB1LQ6UWU2 654 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 TMEM184AQ6ZMB5 413 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 MRPL10Q7Z7H8 261 aaKnown RBP10.52□□□□□ -0.73
NUP50-205ENST00000419387 FERMT3Q86UX7 667 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 RNF149Q8NC42 400 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 VN1R2Q8NFZ6 395 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 MTMR9Q96QG7 549 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 KIF2CQ99661 725 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 MTRQ99707 1265 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 NRDE2Q9H7Z3 1164 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 ANKEF1Q9NU02 776 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 AGPAT5Q9NUQ2 364 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 USP15Q9Y4E8 981 aaPredicted RBP10.52□□□□□ -0.73
NUP50-205ENST00000419387 PCDHB2Q9Y5E7 798 aa10.52□□□□□ -0.73
NUP50-205ENST00000419387 MEIS3P2A8K0S8 358 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 WNT7AO00755 349 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 ZC3H11AO75152 810 aaKnown RBP eCLIP10.51□□□□□ -0.73
NUP50-205ENST00000419387 XRCC6P12956 609 aaKnown RBP eCLIP10.51□□□□□ -0.73
NUP50-205ENST00000419387 TECP42680 631 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 RNASELQ05823 741 aaKnown RBP10.51□□□□□ -0.73
NUP50-205ENST00000419387 MXD4Q14582 209 aaPredicted RBP10.51□□□□□ -0.73
NUP50-205ENST00000419387 SMC1AQ14683 1233 aaKnown RBP10.51□□□□□ -0.73
NUP50-205ENST00000419387 BMS1Q14692 1282 aaKnown RBP10.51□□□□□ -0.73
NUP50-205ENST00000419387 PCBP1Q15365 356 aaKnown RBP eCLIP10.51□□□□□ -0.73
NUP50-205ENST00000419387 ANKRD54Q6NXT1 300 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 AGMOQ6ZNB7 445 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 RNF135Q8IUD6 432 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 CCDC83Q8IWF9 413 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 MRPL43Q8N983 215 aaKnown RBP10.51□□□□□ -0.73
NUP50-205ENST00000419387 TMEM169Q96HH4 297 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 LLPHQ9BRT6 129 aaKnown RBP10.51□□□□□ -0.73
NUP50-205ENST00000419387 PHF7Q9BWX1 381 aaPredicted RBP10.51□□□□□ -0.73
NUP50-205ENST00000419387 S1PR5Q9H228 398 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 XPNPEP1Q9NQW7 623 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 TBC1D13Q9NVG8 400 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 INPP5FQ9Y2H2 1132 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 HCN4Q9Y3Q4 1203 aa10.51□□□□□ -0.73
NUP50-205ENST00000419387 ARIH1Q9Y4X5 557 aaPredicted RBP10.51□□□□□ -0.73
NUP50-205ENST00000419387 C2orf71A6NGG8 1288 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 LOC730098B7Z3J9 87 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 DGAT1O75907 488 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 ERLIN2O94905 339 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 CXCL14O95715 111 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 GALTP07902 379 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 HOXB8P17481 243 aaPredicted RBP10.5□□□□□ -0.73
NUP50-205ENST00000419387 ATP2B1P20020 1258 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 AXLP30530 894 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 MCM7P33993 719 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 PTENP60484 403 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 GUCY1B3Q02153 619 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 POU5F1BQ06416 359 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 TFDP1Q14186 410 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 GSE1Q14687 1217 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 CBX2Q14781 532 aaPredicted RBP10.5□□□□□ -0.73
NUP50-205ENST00000419387 HERC4Q5GLZ8 1057 aaPredicted RBP10.5□□□□□ -0.73
NUP50-205ENST00000419387 UBXN11Q5T124 520 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 LLGL2Q6P1M3 1020 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 DDX53Q86TM3 631 aaKnown RBP10.5□□□□□ -0.73
NUP50-205ENST00000419387 IFNLR1Q8IU57 520 aaPredicted RBP10.5□□□□□ -0.73
NUP50-205ENST00000419387 CNNM3Q8NE01 707 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 URGCPQ8TCY9 931 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 PIGOQ8TEQ8 1089 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 SUSD6Q92537 303 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 IGSF21Q96ID5 467 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 C8orf76Q96K31 380 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 ZSCAN31Q96LW9 406 aaPredicted RBP10.5□□□□□ -0.73
NUP50-205ENST00000419387 TMEM60Q9H2L4 133 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 RSAD1Q9HA92 442 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 KANSL3Q9P2N6 904 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 CNTNAP2Q9UHC6 1331 aa10.5□□□□□ -0.73
NUP50-205ENST00000419387 A0A087WWV3 80 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 CLASP2O75122 1294 aaKnown RBP10.49□□□□□ -0.73
NUP50-205ENST00000419387 DDHD2O94830 711 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 ALDH2P05091 517 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 SPATA31C1P0DKV0 1188 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 NCLP19338 710 aaKnown RBP10.49□□□□□ -0.73
NUP50-205ENST00000419387 CA8P35219 290 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 ARL2P36404 184 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 RARRES1P49788 294 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 HMGN5P82970 282 aaKnown RBP10.49□□□□□ -0.73
NUP50-205ENST00000419387 NCBP1Q09161 790 aaKnown RBP10.49□□□□□ -0.73
NUP50-205ENST00000419387 MMRN1Q13201 1228 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 GIT2Q14161 759 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 SYCE2Q6PIF2 218 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 TMEM173Q86WV6 379 aaPredicted RBP10.49□□□□□ -0.73
NUP50-205ENST00000419387 ZNF280BQ86YH2 543 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 SPNS2Q8IVW8 549 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 VPS52Q8N1B4 723 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 ASAP3Q8TDY4 903 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 CASP10Q92851 521 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 FAM122AQ96E09 287 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 CCDC43Q96MW1 224 aaKnown RBP10.49□□□□□ -0.73
NUP50-205ENST00000419387 FAM193BQ96PV7 902 aaPredicted RBP10.49□□□□□ -0.73
NUP50-205ENST00000419387 BACH2Q9BYV9 841 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 GBP3Q9H0R5 595 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 ZBP1Q9H171 429 aa10.49□□□□□ -0.73
NUP50-205ENST00000419387 FOXP1Q9H334 677 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms