RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 UBE3CQ15386 1083 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 MAN2A1Q16706 1144 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 PTPROQ16827 1216 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 GAGE13Q4V321 117 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 SPTY2D1Q68D10 685 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 ZNF808Q8N4W9 903 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 RSAD2Q8WXG1 361 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 C1QTNF3Q9BXJ4 246 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 KLC2Q9H0B6 622 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 TRHDEQ9UKU6 1024 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 SH3BP1Q9Y3L3 701 aa6.16□□□□□ -1.42
HMGB1P49-201ENST00000418882 FZD9O00144 591 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 WNT10BO00744 389 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 MTSS1O43312 755 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 NRP2O60462 931 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 JUNP05412 331 aaKnown RBP6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 XPAP23025 273 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 CANXP27824 592 aaKnown RBP6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 ABCB5Q2M3G0 1257 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 KRT40Q6A162 431 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 LMBR1LQ6UX01 489 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 MAMDC4Q6UXC1 1216 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 TAS1R1Q7RTX1 841 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 POLNQ7Z5Q5 900 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 GLB1L2Q8IW92 636 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 PALM2Q8IXS6 379 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 CHST13Q8NET6 341 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 RAX2Q96IS3 184 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 SLC2A13Q96QE2 648 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 PUS7LQ9H0K6 701 aaKnown RBP6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 NELFAQ9H3P2 528 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 DMRT3Q9NQL9 472 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 TLR9Q9NR96 1032 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 DNAJC28Q9NX36 388 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 NCDNQ9UBB6 729 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 SCOCQ9UIL1 159 aa6.15□□□□□ -1.42
HMGB1P49-201ENST00000418882 GABRDO14764 452 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 MT-CO1P00395 513 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 ACO1P21399 889 aaKnown RBP6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 COMTP21964 271 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 CTSSP25774 331 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 CASRP41180 1078 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 SELENOPP49908 381 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 FAM214AQ32MH5 1076 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 CMTM4Q8IZR5 234 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 GLB1L3Q8NCI6 653 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 AUTS2Q8WXX7 1259 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 DEF6Q9H4E7 631 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 IFT122Q9HBG6 1241 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 MSL2Q9HCI7 577 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 WASHC2CQ9Y4E1 1318 aa6.14□□□□□ -1.43
HMGB1P49-201ENST00000418882 PCDHGA12O60330 932 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 PRAMEF4O60810 478 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 LTA4HP09960 611 aaKnown RBP6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 NRG3P56975 720 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 PPP3CAQ08209 521 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 FAPQ12884 760 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 ADRM1Q16186 407 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 SYDE2Q5VT97 1194 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 C1orf162Q8NEQ5 155 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 DVL3Q92997 716 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 MTMR8Q96EF0 704 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 ADOQ96SZ5 270 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 MENTQ9BUN1 341 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 PCDHGA9Q9Y5G4 932 aaKnown RBP6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 PCDHGA8Q9Y5G5 932 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 PCDHGA7Q9Y5G6 932 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 PCDHGA6Q9Y5G7 932 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 PCDHGA3Q9Y5H0 932 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 PCDHGA2Q9Y5H1 932 aa6.13□□□□□ -1.43
HMGB1P49-201ENST00000418882 TRIM75PA6NK02 468 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 PLSCR1O15162 318 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 ADCY6O43306 1168 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 ADRB1P08588 477 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 ITKQ08881 620 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 SPDYAQ5MJ70 313 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 WASHC2AQ641Q2 1341 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 FAM111BQ6SJ93 734 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 D2HGDHQ8N465 521 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 SNX33Q8WV41 574 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 TCF25Q9BQ70 676 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 ASPSCR1Q9BZE9 553 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 ZNF277Q9NRM2 450 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 RCAN3Q9UKA8 241 aa6.12□□□□□ -1.43
HMGB1P49-201ENST00000418882 TNKSO95271 1327 aa6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 AGXTP21549 392 aa6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 PCBP2Q15366 365 aaKnown RBP eCLIP6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 C1QL3Q5VWW1 255 aa6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 Q6ZVL8 140 aa6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 RIN2Q8WYP3 895 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 HOXB13Q92826 284 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 EDAQ92838 391 aa6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 ZNF512Q96ME7 567 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 ACE2Q9BYF1 805 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 TUBD1Q9UJT1 453 aa6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 TSC22D4Q9Y3Q8 395 aa6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 TCAF1Q9Y4C2 921 aa6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 GPR45Q9Y5Y3 372 aa6.11□□□□□ -1.43
HMGB1P49-201ENST00000418882 ZMYM3Q14202 1370 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms