RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 MEX3CQ5U5Q3 659 aaKnown RBP13.71□□□□□ -0.21
HERC3-203ENST00000407637 TCERG1LQ5VWI1 586 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 SRRM1Q8IYB3 904 aaKnown RBP13.71□□□□□ -0.21
HERC3-203ENST00000407637 SH3RF3Q8TEJ3 882 aaPredicted RBP13.71□□□□□ -0.21
HERC3-203ENST00000407637 MPP4Q96JB8 637 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 CLMNQ96JQ2 1002 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 METTL14Q9HCE5 456 aaKnown RBP13.71□□□□□ -0.21
HERC3-203ENST00000407637 TBK1Q9UHD2 729 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 CIDEBQ9UHD4 219 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 PHTF1Q9UMS5 762 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 AMOTL2Q9Y2J4 779 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 DOCK2Q92608 1830 aa13.71□□□□□ -0.21
HERC3-203ENST00000407637 CASZ1Q86V15 1759 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 KAT6BQ8WYB5 2073 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 TRAF5O00463 557 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 SUPT3HO75486 399 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 H2AFZP0C0S5 128 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 VAV1P15498 845 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 ATP5DP30049 168 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 TTLL12Q14166 644 aaPredicted RBP13.71□□□□□ -0.22
HERC3-203ENST00000407637 H2AFVQ71UI9 128 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 CYP4X1Q8N118 509 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 LZICQ8WZA0 190 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 NMD3Q96D46 503 aaKnown RBP13.71□□□□□ -0.22
HERC3-203ENST00000407637 SERPINB12Q96P63 405 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 STARD13Q9Y3M8 1113 aa13.71□□□□□ -0.22
HERC3-203ENST00000407637 BAZ2AQ9UIF9 1905 aaKnown RBP13.7□□□□□ -0.22
HERC3-203ENST00000407637 WNK3Q9BYP7 1800 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 MAP7Q14244 749 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 ZBTB8BQ8NAP8 495 aaPredicted RBP13.7□□□□□ -0.22
HERC3-203ENST00000407637 TTLL11Q8NHH1 800 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 WDR66Q8TBY9 1149 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 STMN2Q93045 179 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 SLC35B4Q969S0 331 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 RUNDC3BQ96NL0 473 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 OLFM3Q96PB7 478 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 STK32BQ9NY57 414 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 TMEM2Q9UHN6 1383 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 UMODL1Q5DID0 1318 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 EXOC3O60645 756 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 IFIT5Q13325 482 aaKnown RBP13.7□□□□□ -0.22
HERC3-203ENST00000407637 PPP2R5CQ13362 524 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 PPP2R5EQ16537 467 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 TTC27Q6P3X3 843 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 IZUMO2Q6UXV1 221 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 UNC13DQ70J99 1090 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 NELFCDQ8IXH7 590 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 CFAP61Q8NHU2 1237 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 SDR42E1Q8WUS8 393 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 WDR60Q8WVS4 1066 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 ZNF512BQ96KM6 892 aaPredicted RBP13.7□□□□□ -0.22
HERC3-203ENST00000407637 MIS12Q9H081 205 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 DDX43Q9NXZ2 648 aaKnown RBP13.7□□□□□ -0.22
HERC3-203ENST00000407637 TMOD4Q9NZQ9 345 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 STX18Q9P2W9 335 aaKnown RBP13.7□□□□□ -0.22
HERC3-203ENST00000407637 TUBGCP4Q9UGJ1 667 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 PARP2Q9UGN5 583 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 ZFP69BQ9UJL9 534 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 KIF13AQ9H1H9 1805 aa13.7□□□□□ -0.22
HERC3-203ENST00000407637 DLEC1Q9Y238 1755 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 PHF2O75151 1096 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 ZNF24P17028 368 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 EPS15P42566 896 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 RASA3Q14644 834 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 C10orf82Q8WW14 230 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 DNAJC17Q9NVM6 304 aaKnown RBP13.69□□□□□ -0.22
HERC3-203ENST00000407637 ARPP21Q9UBL0 812 aaPredicted RBP13.69□□□□□ -0.22
HERC3-203ENST00000407637 PCDHA4Q9UN74 947 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 TBC1D30Q9Y2I9 924 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 PTPN22Q9Y2R2 807 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 PCDHA3Q9Y5H8 950 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 NUMBLQ9Y6R0 609 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 CALML3P27482 149 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 WDR4P57081 412 aaKnown RBP13.69□□□□□ -0.22
HERC3-203ENST00000407637 IL9RQ01113 521 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 TMED1Q13445 227 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.69□□□□□ -0.22
HERC3-203ENST00000407637 ST13P4Q8IZP2 240 aaPredicted RBP13.69□□□□□ -0.22
HERC3-203ENST00000407637 U2AF1L4Q8WU68 220 aaKnown RBP13.69□□□□□ -0.22
HERC3-203ENST00000407637 DUOX1Q9NRD9 1551 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
HERC3-203ENST00000407637 IGSF9BQ9UPX0 1349 aa13.69□□□□□ -0.22
HERC3-203ENST00000407637 CYP2D7A0A087X1C5 515 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 A0A0A6YYK5 440 aaPredicted RBP13.68□□□□□ -0.22
HERC3-203ENST00000407637 RNASEH1O60930 286 aaKnown RBP13.68□□□□□ -0.22
HERC3-203ENST00000407637 DDAH1O94760 285 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 OR6B1O95007 311 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 CALM1P0DP23 149 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 CALM2P0DP24 149 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 CALM3P0DP25 149 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 GRIA2P42262 883 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 SH3BGRP55822 239 aaPredicted RBP13.68□□□□□ -0.22
HERC3-203ENST00000407637 ZCWPW2Q504Y3 356 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 CFAP157Q5JU67 520 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 LDHAL6AQ6ZMR3 332 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 SV2BQ7L1I2 683 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 CCDC125Q86Z20 511 aa13.68□□□□□ -0.22
HERC3-203ENST00000407637 RBM46Q8TBY0 533 aaKnown RBP13.68□□□□□ -0.22
HERC3-203ENST00000407637 ALG3Q92685 438 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms