RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 RSPH10BP0C881 870 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 SCP2P22307 547 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 PSMA2P25787 234 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 DALRD3Q5D0E6 543 aaKnown RBP18.9■□□□□ 0.62
SNED1-204ENST00000401884 MMS22LQ6ZRQ5 1243 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 DUSP9Q99956 384 aaKnown RBP18.9■□□□□ 0.62
SNED1-204ENST00000401884 PITPNM3Q9BZ71 974 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 ZBTB12Q9Y330 459 aaPredicted RBP18.9■□□□□ 0.62
SNED1-204ENST00000401884 LRRIQ3A6PVS8 624 aaPredicted RBP18.9■□□□□ 0.62
SNED1-204ENST00000401884 PDE1BQ01064 536 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 EAPPQ56P03 285 aaPredicted RBP18.9■□□□□ 0.62
SNED1-204ENST00000401884 LMBRD2Q68DH5 695 aaPredicted RBP18.9■□□□□ 0.62
SNED1-204ENST00000401884 RPF1Q9H9Y2 349 aaKnown RBP18.9■□□□□ 0.62
SNED1-204ENST00000401884 SEPT10Q9P0V9 454 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 PABPN1LA6NDY0 278 aaKnown RBP18.9■□□□□ 0.62
SNED1-204ENST00000401884 ARHGAP42A6NI28 874 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 TRIM66O15016 1216 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 TRIM68Q6AZZ1 485 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 ENOSF1Q7L5Y1 443 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 PPP1R16BQ96T49 567 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 ANKZF1Q9H8Y5 726 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 NGRNQ9NPE2 291 aaKnown RBP18.9■□□□□ 0.62
SNED1-204ENST00000401884 GUCY2CP25092 1073 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 MDH1P40925 334 aaKnown RBP18.9■□□□□ 0.62
SNED1-204ENST00000401884 SESN3P58005 492 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 FAM47EQ6ZV65 393 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 OR2W6PQ8NHA6 318 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 CDKL2Q92772 493 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 MED10Q9BTT4 135 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 KCND1Q9NSA2 647 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 HOXC10Q9NYD6 342 aa18.9■□□□□ 0.62
SNED1-204ENST00000401884 EIF3HO15372 352 aaKnown RBP eCLIP18.89■□□□□ 0.61
SNED1-204ENST00000401884 PRPSAP2O60256 369 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 BRAFP15056 766 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 HDLBPQ00341 1268 aaKnown RBP18.89■□□□□ 0.61
SNED1-204ENST00000401884 MUM1Q2TAK8 710 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 SCYL3Q8IZE3 742 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 SLC30A5Q8TAD4 765 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 GABPB2Q8TAK5 448 aaPredicted RBP18.89■□□□□ 0.61
SNED1-204ENST00000401884 KCND2Q9NZV8 630 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 TCHHQ07283 1943 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 M0QZ92 97 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 HEXIM2Q96MH2 286 aaKnown RBP18.89■□□□□ 0.61
SNED1-204ENST00000401884 ALG6Q9Y672 507 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 GYS1P13807 737 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 PRLRP16471 622 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 GNA15P30679 374 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 GPD1LQ8N335 351 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 RNF169Q8NCN4 708 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 CFAP61Q8NHU2 1237 aa18.89■□□□□ 0.61
SNED1-204ENST00000401884 SLC12A2P55011 1212 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 HACE1Q8IYU2 909 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 THOC1Q96FV9 657 aaKnown RBP18.88■□□□□ 0.61
SNED1-204ENST00000401884 PIM2Q9P1W9 311 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 CASP4P49662 377 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 CAV1Q03135 178 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 PDZD4Q76G19 769 aaPredicted RBP18.88■□□□□ 0.61
SNED1-204ENST00000401884 RHOT1Q8IXI2 618 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 SCFD1Q8WVM8 642 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 POLR3CQ9BUI4 534 aaPredicted RBP18.88■□□□□ 0.61
SNED1-204ENST00000401884 POLR3FQ9H1D9 316 aaPredicted RBP18.88■□□□□ 0.61
SNED1-204ENST00000401884 AGO2Q9UKV8 859 aaKnown RBP18.88■□□□□ 0.61
SNED1-204ENST00000401884 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
SNED1-204ENST00000401884 C3P01024 1663 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 EIF3DO15371 548 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNED1-204ENST00000401884 TMEM253P0C7T8 217 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 BYSLQ13895 437 aaKnown RBP18.88■□□□□ 0.61
SNED1-204ENST00000401884 SMC1BQ8NDV3 1235 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 CHMP6Q96FZ7 201 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 RIT2Q99578 217 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 CELF4Q9BZC1 486 aaKnown RBP18.88■□□□□ 0.61
SNED1-204ENST00000401884 IFT122Q9HBG6 1241 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 RBAKQ9NYW8 714 aaPredicted RBP18.88■□□□□ 0.61
SNED1-204ENST00000401884 GBP7Q8N8V2 638 aaPredicted RBP18.88■□□□□ 0.61
SNED1-204ENST00000401884 CCT8L2Q96SF2 557 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 RUSC1Q9BVN2 902 aa18.88■□□□□ 0.61
SNED1-204ENST00000401884 H3BQF6 201 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 GGPS1O95749 300 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 SNRNP35Q16560 246 aaKnown RBP18.87■□□□□ 0.61
SNED1-204ENST00000401884 CDO1Q16878 200 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 PHLDB3Q6NSJ2 640 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 MTRQ99707 1265 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 GINM1Q9NU53 330 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 FDX1P10109 184 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 BAATQ14032 418 aaPredicted RBP18.87■□□□□ 0.61
SNED1-204ENST00000401884 LRRC14Q15048 493 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 DPP9Q86TI2 863 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 PSPC1Q8WXF1 523 aaKnown RBP18.87■□□□□ 0.61
SNED1-204ENST00000401884 NUDT12Q9BQG2 462 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 EFCC1Q9HA90 598 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 FBXO28Q9NVF7 368 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 CPP00450 1065 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 PLS3P13797 630 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 TBXAS1P24557 533 aaPredicted RBP18.87■□□□□ 0.61
SNED1-204ENST00000401884 PON1P27169 355 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 EZH2Q15910 746 aaKnown RBP18.87■□□□□ 0.61
SNED1-204ENST00000401884 KCTD17Q8N5Z5 321 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 FAM151AQ8WW52 585 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 PACSIN1Q9BY11 444 aa18.87■□□□□ 0.61
SNED1-204ENST00000401884 CALB1P05937 261 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms