RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 GSTA4O15217 222 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 ORC4O43929 436 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 FGFR4P22455 802 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 KRT17Q04695 432 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 TRIM72Q6ZMU5 477 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 SLC16A3O15427 465 aaKnown RBP18.3■□□□□ 0.52
SIN3A-203ENST00000394949 PRLRP16471 622 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 CARSP49589 748 aaKnown RBP18.3■□□□□ 0.52
SIN3A-203ENST00000394949 PDIA2Q13087 525 aaKnown RBP18.3■□□□□ 0.52
SIN3A-203ENST00000394949 NUDCD3Q8IVD9 361 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 TRABDQ9H4I3 376 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 TRIM10Q9UDY6 481 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 ARAP3Q8WWN8 1544 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 SLC1A1P43005 524 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 SEC24CP53992 1094 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 NOP14P78316 857 aaKnown RBP18.3■□□□□ 0.52
SIN3A-203ENST00000394949 HIC1Q14526 733 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 HLFQ16534 295 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 USP38Q8NB14 1042 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 DHX38Q92620 1227 aaKnown RBP18.3■□□□□ 0.52
SIN3A-203ENST00000394949 SYN2Q92777 582 aaPredicted RBP18.3■□□□□ 0.52
SIN3A-203ENST00000394949 KCNB2Q92953 911 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 BTBD6Q96KE9 485 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 DDX56Q9NY93 547 aaKnown RBP18.3■□□□□ 0.52
SIN3A-203ENST00000394949 IP6K2Q9UHH9 426 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 POLR1AO95602 1720 aaPredicted RBP18.29■□□□□ 0.52
SIN3A-203ENST00000394949 RAD51CO43502 376 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 TAC1P20366 129 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 RASSF3Q86WH2 238 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 ZBED8Q8IZ13 594 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 FAM149B1Q96BN6 582 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 NOD2Q9HC29 1040 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 MROH7-TTC4A0A0A0MT08 1334 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 PP2D1A8MPX8 630 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 TFAMQ00059 246 aaKnown RBP18.29■□□□□ 0.52
SIN3A-203ENST00000394949 GPS1Q13098 491 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 MED21Q13503 144 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 NAB2Q15742 525 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 ARHGEF37A1IGU5 675 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 PSAPP07602 524 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 ADRA2BP18089 450 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 IL1RL1Q01638 556 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 OCRLQ01968 901 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 DCAF4Q8WV16 495 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 GCOM2Q9BZD3 368 aaPredicted RBP18.29■□□□□ 0.52
SIN3A-203ENST00000394949 UNC13BO14795 1591 aa18.29■□□□□ 0.52
SIN3A-203ENST00000394949 PPP1R12AO14974 1030 aaPredicted RBP18.28■□□□□ 0.52
SIN3A-203ENST00000394949 GCLMP48507 274 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 SLC26A7Q8TE54 656 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 VPS39Q96JC1 886 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 MADDQ8WXG6 1647 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 KRT7P08729 469 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 CASP2P42575 452 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 RSRC2Q7L4I2 434 aaKnown RBP18.28■□□□□ 0.52
SIN3A-203ENST00000394949 LONP2Q86WA8 852 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 ABI1Q8IZP0 508 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 BBS5Q8N3I7 341 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 GIMAP8Q8ND71 665 aaPredicted RBP18.28■□□□□ 0.52
SIN3A-203ENST00000394949 MYCBPAPQ8TBZ2 947 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 ZWILCHQ9H900 591 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 HECW2Q9P2P5 1572 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 GOLGA8IPA6NC78 632 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 GOLGA8JA6NMD2 632 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 ENO4A6NNW6 628 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 SLC26A4O43511 780 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 CHEK2O96017 543 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 VAMP7P51809 220 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 COPS2P61201 443 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 DACT3Q96B18 629 aaPredicted RBP18.28■□□□□ 0.52
SIN3A-203ENST00000394949 ERGIC2Q96RQ1 377 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 TRPV6Q9H1D0 765 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 RANBP17Q9H2T7 1088 aaKnown RBP18.28■□□□□ 0.52
SIN3A-203ENST00000394949 CDC42BPBQ9Y5S2 1711 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 FAM47DPA6NHR8 397 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 MARK3P27448 753 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 DALRD3Q5D0E6 543 aaKnown RBP18.28■□□□□ 0.52
SIN3A-203ENST00000394949 PDXDC2PQ6P474 469 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 ABCC3O15438 1527 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 CLTCL1P53675 1640 aa18.28■□□□□ 0.52
SIN3A-203ENST00000394949 RTN2O75298 545 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 FDPSP14324 419 aaKnown RBP18.27■□□□□ 0.52
SIN3A-203ENST00000394949 IREB2P48200 963 aaKnown RBP18.27■□□□□ 0.52
SIN3A-203ENST00000394949 PODNQ7Z5L7 613 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 RIBC1Q8N443 379 aaPredicted RBP18.27■□□□□ 0.52
SIN3A-203ENST00000394949 AGPAT1Q99943 283 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 APOL6Q9BWW8 343 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 PRDM4Q9UKN5 801 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 HNRNPCP07910 306 aaKnown RBP eCLIP18.27■□□□□ 0.52
SIN3A-203ENST00000394949 KCNA3P22001 575 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 GUCY1A2P33402 732 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 DAB2IPQ5VWQ8 1189 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 DCLK2Q8N568 766 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 VCPKMTQ9H867 229 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 KRT82Q9NSB4 513 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 UVRAGQ9P2Y5 699 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 TTC7AQ9ULT0 858 aaPredicted RBP18.27■□□□□ 0.52
SIN3A-203ENST00000394949 IQSEC2Q5JU85 1478 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 POTEB3A0JP26 581 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 POTECB2RU33 542 aa18.27■□□□□ 0.52
SIN3A-203ENST00000394949 ITIH4Q14624 930 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms