RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 WDR93Q6P2C0 686 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 RNF207Q6ZRF8 634 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 FAM160B2Q86V87 743 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 MAP4K3Q8IVH8 894 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 C12orf56Q8IXR9 622 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 PARVGQ9HBI0 331 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 KCNH4Q9UQ05 1017 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 USO1O60763 962 aaKnown RBP9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 CYP4V2Q6ZWL3 525 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 SCFD2Q8WU76 684 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 LENG1Q96BZ8 264 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 CAPZA3Q96KX2 299 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 IFT122Q9HBG6 1241 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 GCNT4Q9P109 453 aa9.24□□□□□ -0.93
GAPVD1-204ENST00000394083 RHOXF2BP0C7M4 288 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 HOXA7P31268 230 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 ALDH5A1P51649 535 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 USP14P54578 494 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 KIF22Q14807 665 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 CCDC122Q5T0U0 273 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 RETREG2Q8NC44 543 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 SYN2Q92777 582 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 MFSD14AQ96MC6 490 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 RHOXF2Q9BQY4 288 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 G3V3G9 751 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 AMHP03971 560 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 PROZP22891 400 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 TXLNAP40222 546 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 PEX3P56589 373 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 CAPSQ13938 189 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 LONRF2Q1L5Z9 754 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 FKBP15Q5T1M5 1219 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 DCAF8Q5TAQ9 597 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 DDX42Q86XP3 938 aaKnown RBP eCLIP9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 CCDC170Q8IYT3 715 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 SPATA4Q8NEY3 305 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 MORC4Q8TE76 937 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 L3MBTL3Q96JM7 780 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 ZNF668Q96K58 619 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 CALCOCO1Q9P1Z2 691 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 EMSYQ7Z589 1322 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 PLS3P13797 630 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 CNGA1P29973 690 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 GCLMP48507 274 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 CYP2J2P51589 502 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 ODR4Q5SWX8 454 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 SEC14L1Q92503 715 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 JAKMIP2Q96AA8 810 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 TMEM143Q96AN5 459 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 DRC1Q96MC2 740 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 ASCC2Q9H1I8 757 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 HSPBP1Q9NZL4 362 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 HOOK1Q9UJC3 728 aaKnown RBP9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 TBX20Q9UMR3 447 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 NEU2Q9Y3R4 380 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 C4BPAP04003 597 aaKnown RBP9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 ERVK-9P63128 1117 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 HAUS6Q7Z4H7 955 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 TPCN2Q8NHX9 752 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 KHSRPQ92945 711 aaKnown RBP eCLIP9.23□□□□□ -0.933e-7■■□□□ 14.2
GAPVD1-204ENST00000394083 CDHR5Q9HBB8 845 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 GABBR1Q9UBS5 961 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 HMGXB4Q9UGU5 601 aa9.23□□□□□ -0.93
GAPVD1-204ENST00000394083 GFPT2O94808 682 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 MMEP08473 750 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 ICAM3P32942 547 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 QARSP47897 775 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 CHMP4BP1P59074 171 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 OGDHQ02218 1023 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 CCDC142Q17RM4 750 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 SWSAP1Q6NVH7 229 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 CDR2LQ86X02 465 aaPredicted RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 EFCAB13Q8IY85 973 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 ZNF397Q8NF99 534 aaPredicted RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 HNRNPLLQ8WVV9 542 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 CCDC34Q96HJ3 373 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 PYM1Q9BRP8 204 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 IFIH1Q9BYX4 1025 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 XYLT2Q9H1B5 865 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 GRIN2DO15399 1336 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 PLXNA4Q9HCM2 1894 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 NUP205Q92621 2012 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 BICDL2A1A5D9 508 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 GTPBP10A4D1E9 387 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 BUB1BO60566 1050 aaPredicted RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 P4HBP07237 508 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 UNGP13051 313 aaPredicted RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 CYP3A5P20815 502 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 CARSP49589 748 aaKnown RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 DRAP1Q14919 205 aaPredicted RBP9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 TMEM266Q2M3C6 531 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 TTMPQ5BVD1 217 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 MROH7Q68CQ1 1323 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 FAM71AQ8IYT1 594 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 MYCT1Q8N699 235 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 METTL13Q8N6R0 699 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 CHURC1Q8WUH1 139 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 SDCBP2Q9H190 292 aa9.22□□□□□ -0.93
GAPVD1-204ENST00000394083 FOXO6A8MYZ6 492 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms