RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 KIFC3Q9BVG8 833 aa20.98■□□□□ 0.95
SHANK1-203ENST00000391813 CCSER1Q9C0I3 900 aa20.98■□□□□ 0.95
SHANK1-203ENST00000391813 RAB21Q9UL25 225 aa20.98■□□□□ 0.95
SHANK1-203ENST00000391813 CDK8P49336 464 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 RAD54LQ92698 747 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 SMYD3Q9H7B4 428 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 PPCSQ9HAB8 311 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 NR3C1P04150 777 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 PRLRP16471 622 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 NEDD4P46934 1319 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 EPHB1P54762 984 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 RABGAP1LQ5R372 815 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 CALN1Q9BXU9 219 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 PDP2Q9P2J9 529 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 LRRIQ3A6PVS8 624 aaPredicted RBP20.97■□□□□ 0.95
SHANK1-203ENST00000391813 MARK3P27448 753 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 ITPK1Q13572 414 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 DNAL1Q4LDG9 190 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 SPICE1Q8N0Z3 855 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 ATP11CQ8NB49 1132 aa20.97■□□□□ 0.95
SHANK1-203ENST00000391813 HSPA4LO95757 839 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 ACADSP16219 412 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 DYNLT1P63172 113 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 FAM47CQ5HY64 1035 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 CNPY4Q8N129 248 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 IPO11Q9UI26 975 aaKnown RBP20.96■□□□□ 0.95
SHANK1-203ENST00000391813 TRIM33Q9UPN9 1127 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 GNGT2O14610 69 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 NAALADL2Q58DX5 795 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 RAB44Q7Z6P3 723 aaPredicted RBP20.96■□□□□ 0.95
SHANK1-203ENST00000391813 RIOK1Q9BRS2 568 aaKnown RBP20.96■□□□□ 0.95
SHANK1-203ENST00000391813 AP5M1Q9H0R1 490 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 TRIM10Q9UDY6 481 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 ZNF711Q9Y462 761 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 SLC4A7Q9Y6M7 1214 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 COASYQ13057 564 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 LONP2Q86WA8 852 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 SMYD2Q9NRG4 433 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 MROH7-TTC4A0A0A0MT08 1334 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 PFDN6O15212 129 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 PRPSAP1Q14558 356 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 SYDE2Q5VT97 1194 aa20.96■□□□□ 0.95
SHANK1-203ENST00000391813 PRDX5P30044 214 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 ITIH4Q14624 930 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 KCTD6Q8NC69 237 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 SLC26A7Q8TE54 656 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 MS4A14Q96JA4 679 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 ATP6V0A4Q9HBG4 840 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 STRIP1Q5VSL9 837 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 ANKRD40Q6AI12 368 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 DEPDC1BQ8WUY9 529 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 TDRD3Q9H7E2 651 aaKnown RBP20.95■□□□□ 0.94
SHANK1-203ENST00000391813 WDR46O15213 610 aaKnown RBP20.95■□□□□ 0.94
SHANK1-203ENST00000391813 AP5Z1O43299 807 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 CHRNA5P30532 468 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 HIC1Q14526 733 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 ZNF564Q8TBZ8 553 aaPredicted RBP20.95■□□□□ 0.94
SHANK1-203ENST00000391813 PCIF1Q9H4Z3 704 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 EHD2Q9NZN4 543 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 SEPT10Q9P0V9 454 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 FBXO40Q9UH90 709 aa20.95■□□□□ 0.94
SHANK1-203ENST00000391813 IGF2BP3O00425 579 aaKnown RBP eCLIP20.94■□□□□ 0.94
SHANK1-203ENST00000391813 RAD51CO43502 376 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 MED7O43513 233 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 INPP1P49441 399 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 COPS2P61201 443 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 FOXO4P98177 505 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 CYLC2Q14093 348 aaPredicted RBP20.94■□□□□ 0.94
SHANK1-203ENST00000391813 KNOP1Q1ED39 458 aaKnown RBP20.94■□□□□ 0.94
SHANK1-203ENST00000391813 DAB2IPQ5VWQ8 1189 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 TEKT4Q8WW24 435 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 ERP27Q96DN0 273 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 FOXP3Q9BZS1 431 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 BHMT2Q9H2M3 363 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 AGPAT5Q9NUQ2 364 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 MEIS1O00470 390 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 MAN1A2O60476 641 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 RHOBTB3O94955 611 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 SRGAP2BP0DMP2 458 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 PSMD7P51665 324 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 MIGA2Q7L4E1 593 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 HIC2Q96JB3 615 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 NBPF3Q9H094 633 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 DLGAP2Q9P1A6 1054 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 ZBED1O96006 694 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 CCDC117Q8IWD4 279 aaPredicted RBP20.94■□□□□ 0.94
SHANK1-203ENST00000391813 USP38Q8NB14 1042 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 COA7Q96BR5 231 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 ALKBH8Q96BT7 664 aaKnown RBP20.94■□□□□ 0.94
SHANK1-203ENST00000391813 KLC2Q9H0B6 622 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 ANKFY1Q9P2R3 1169 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 CEMIPQ8WUJ3 1361 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 GOLGA8SH3BPF8 625 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 NCAPHQ15003 741 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 PAPD7Q5XG87 772 aaKnown RBP20.94■□□□□ 0.94
SHANK1-203ENST00000391813 TBC1D16Q8TBP0 767 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 CFAP36Q96G28 342 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 ZNF577Q9BSK1 485 aa20.94■□□□□ 0.94
SHANK1-203ENST00000391813 KPNA7A9QM74 516 aa20.93■□□□□ 0.94
SHANK1-203ENST00000391813 ACAD11Q709F0 780 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms