RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 POLR3FQ9H1D9 316 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 TAF1DQ9H5J8 278 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 MYO3BQ8WXR4 1341 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 ATP8B1O43520 1251 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 NPR1P16066 1061 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 BPIFB4P59827 614 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 TSGA10IPQ3SY00 556 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 RCSD1Q6JBY9 416 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 HAUS6Q7Z4H7 955 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 LDHDQ86WU2 507 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 SCN4BQ8IWT1 228 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 REXO1L1PQ8IX06 675 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 PDIK1LQ8N165 341 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 PPP1R13LQ8WUF5 828 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 IL17RAQ96F46 866 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 TMEM39BQ9GZU3 492 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 KIF9Q9HAQ2 790 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 ETNK1Q9HBU6 452 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 MRPL47Q9HD33 250 aaKnown RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 SARS2Q9NP81 518 aaKnown RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 POLIQ9UNA4 740 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CAPN6Q9Y6Q1 641 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 TCHHQ07283 1943 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 HMGB1P1B2RPK0 211 aaPredicted RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 M0QYV0 167 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 STXBP3O00186 592 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 DIAPH2O60879 1101 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 NDUFB10O96000 172 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 WEE2P0C1S8 567 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CPA2P48052 419 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 PSMC1P62191 440 aaKnown RBP5.33□□□□□ -1.56
LTN1-202ENST00000389194 PPP2R2AP63151 447 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 AMHR2Q16671 573 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CIAPIN1Q6FI81 312 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 C3orf67Q6ZVT6 689 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CCNYL1Q8N7R7 359 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 ATG4AQ8WYN0 398 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CDKL2Q92772 493 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 AGBL1Q96MI9 1066 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 CFAP57Q96MR6 1250 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.33□□□□□ -1.564e-7■■■■□ 20.1
LTN1-202ENST00000389194 CCDC68Q9H2F9 335 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 RNF19AQ9NV58 838 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 MTMR4Q9NYA4 1195 aa5.33□□□□□ -1.56
LTN1-202ENST00000389194 SYNDIG1LA6NDD5 238 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 SPDYE2BA6NHP3 402 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 SPDYE6P0CI01 402 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 PDHBP11177 359 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 LCP1P13796 627 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 UCHL3P15374 230 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 KDSRQ06136 332 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 NSUN2Q08J23 767 aaKnown RBP eCLIP5.32□□□□□ -1.56
LTN1-202ENST00000389194 NFIAQ12857 509 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 PPP2R5EQ16537 467 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 TMED8Q6PL24 325 aaPredicted RBP5.32□□□□□ -1.56
LTN1-202ENST00000389194 CATSPER4Q7RTX7 472 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 TTLL6Q8N841 843 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 TBC1D16Q8TBP0 767 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 ZIM3Q96PE6 472 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 TMEM150BA6NC51 233 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 PALM3A6NDB9 673 aaPredicted RBP5.32□□□□□ -1.56
LTN1-202ENST00000389194 GYG2O15488 501 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 ATP9BO43861 1147 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 CALCAP01258 141 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 PDGFRBP09619 1106 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 RASA1P20936 1047 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 ARL4AP40617 200 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 MAGEA9P43362 315 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 ARSEP51690 589 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 AP1B1Q10567 949 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 ZNF667Q5HYK9 610 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 FAXCQ5TGI0 409 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 CENPUQ71F23 418 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 FOXP4Q8IVH2 680 aaPredicted RBP5.32□□□□□ -1.56
LTN1-202ENST00000389194 FAM205AQ6ZU69 1335 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 CNTNAP5Q8WYK1 1306 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 SCP2P22307 547 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 EEF1B2P24534 225 aaKnown RBP5.32□□□□□ -1.56
LTN1-202ENST00000389194 SLC8A1P32418 973 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 PLA2G4AP47712 749 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 QARSP47897 775 aaKnown RBP5.32□□□□□ -1.56
LTN1-202ENST00000389194 SESN2P58004 480 aaPredicted RBP5.32□□□□□ -1.56
LTN1-202ENST00000389194 C6orf118Q5T5N4 469 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 SIX6OS1Q8N1H7 587 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 LRRC71Q8N4P6 559 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 ECT2Q9H8V3 914 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 RBAKQ9NYW8 714 aaPredicted RBP5.32□□□□□ -1.56
LTN1-202ENST00000389194 PPP1R9AQ9ULJ8 1098 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 ASNSP08243 561 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 EML3Q32P44 896 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 FAM102AQ5T9C2 384 aaPredicted RBP5.32□□□□□ -1.56
LTN1-202ENST00000389194 CYP4A22Q5TCH4 519 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 IZUMO3Q5VZ72 239 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 GUF1Q8N442 669 aaKnown RBP5.32□□□□□ -1.56
LTN1-202ENST00000389194 MASTLQ96GX5 879 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 FGD4Q96M96 766 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 TRIM4Q9C037 500 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 EHD4Q9H223 541 aa5.32□□□□□ -1.56
LTN1-202ENST00000389194 DHX35Q9H5Z1 703 aaKnown RBP5.32□□□□□ -1.56
LTN1-202ENST00000389194 SH3GLB2Q9NR46 395 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms