RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 CDC42EP5Q6NZY7 148 aa18.28■□□□□ 0.52
MCF2L-203ENST00000375604 CDHR2Q9BYE9 1310 aa18.28■□□□□ 0.52
MCF2L-203ENST00000375604 PLA2R1Q13018 1463 aa18.28■□□□□ 0.52
MCF2L-203ENST00000375604 BAATQ14032 418 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-203ENST00000375604 DDX53Q86TM3 631 aaKnown RBP18.27■□□□□ 0.52
MCF2L-203ENST00000375604 PDIK1LQ8N165 341 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 PPP1R9AQ9ULJ8 1098 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 ATP9BO43861 1147 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 CAPRIN1Q14444 709 aaKnown RBP18.27■□□□□ 0.52
MCF2L-203ENST00000375604 CCDC144BQ3MJ40 725 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 SYNDIG1Q9H7V2 258 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 NUGGCQ68CJ6 796 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 FBXL13Q8NEE6 735 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 MS4A14Q96JA4 679 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 JPH1Q9HDC5 661 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-203ENST00000375604 EPS15L1Q9UBC2 864 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 ADCY10Q96PN6 1610 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 TMEM35BQ8NCS4 154 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 WHAMMQ8TF30 809 aa18.27■□□□□ 0.52
MCF2L-203ENST00000375604 GRAP2O75791 330 aa18.27■□□□□ 0.51
MCF2L-203ENST00000375604 SULT1E1P49888 294 aa18.27■□□□□ 0.51
MCF2L-203ENST00000375604 FMR1NBQ8N0W7 255 aaPredicted RBP18.27■□□□□ 0.51
MCF2L-203ENST00000375604 A2ML1A8K2U0 1454 aa18.27■□□□□ 0.51
MCF2L-203ENST00000375604 E5RI56 91 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 ZNF185O15231 689 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 KLRK1P26718 216 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 ERFP50548 548 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.26■□□□□ 0.51
MCF2L-203ENST00000375604 PAMP19021 973 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 FBXW4P57775 412 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 PRR5LQ6MZQ0 368 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 CCNYL1Q8N7R7 359 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 Q9H521 79 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 XAB2Q9HCS7 855 aaKnown RBP18.26■□□□□ 0.51
MCF2L-203ENST00000375604 NDFIP2Q9NV92 336 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 ORC6Q9Y5N6 252 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 CEP152O94986 1710 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 CPSF1Q10570 1443 aaKnown RBP18.26■□□□□ 0.51
MCF2L-203ENST00000375604 TET3O43151 1660 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 COPEO14579 308 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 N4BP2L2Q92802 583 aaPredicted RBP18.26■□□□□ 0.51
MCF2L-203ENST00000375604 HAUS8Q9BT25 410 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 ARHGEF37A1IGU5 675 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 ZRANB2O95218 330 aaKnown RBP eCLIP18.26■□□□□ 0.51
MCF2L-203ENST00000375604 RARBP10826 455 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 NOP14P78316 857 aaKnown RBP18.26■□□□□ 0.51
MCF2L-203ENST00000375604 MTF1Q14872 753 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 LRRC71Q8N4P6 559 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 PPM1NQ8N819 430 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 DDX47Q9H0S4 455 aaKnown RBP18.26■□□□□ 0.51
MCF2L-203ENST00000375604 GGA3Q9NZ52 723 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 CHORDC1Q9UHD1 332 aaPredicted RBP18.26■□□□□ 0.51
MCF2L-203ENST00000375604 APOEP02649 317 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 MDH1BQ5I0G3 518 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 LRRC31Q6UY01 552 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 RHOT2Q8IXI1 618 aa18.26■□□□□ 0.51
MCF2L-203ENST00000375604 RASA4BC9J798 803 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 RASA4O43374 803 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 MTM1Q13496 603 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 ZNF513Q8N8E2 541 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-203ENST00000375604 AGAP3Q96P47 875 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 SYF2O95926 243 aaKnown RBP18.25■□□□□ 0.51
MCF2L-203ENST00000375604 PRKCBP05771 671 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 SDC4P31431 198 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 ZBED8Q8IZ13 594 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 ARHGAP31Q2M1Z3 1444 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 ZC2HC1CQ53FD0 456 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-203ENST00000375604 SRRM1Q8IYB3 904 aaKnown RBP18.25■□□□□ 0.51
MCF2L-203ENST00000375604 C6orf222P0C671 652 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-203ENST00000375604 KLHL29Q96CT2 875 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 ACAP3Q96P50 834 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 DCTN4Q9UJW0 460 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 NCAPD2Q15021 1401 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 NLRP11P59045 1033 aaKnown RBP18.25■□□□□ 0.51
MCF2L-203ENST00000375604 CCHCR1Q8TD31 782 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 FAM20AQ96MK3 541 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 TRAIPQ9BWF2 469 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 OSBPL5Q9H0X9 879 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-203ENST00000375604 ZNF70Q9UC06 446 aaPredicted RBP18.25■□□□□ 0.51
MCF2L-203ENST00000375604 LAMC1P11047 1609 aa18.25■□□□□ 0.51
MCF2L-203ENST00000375604 GCKP35557 465 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 KLK7P49862 253 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 STAT5BP51692 787 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 LBRQ14739 615 aaKnown RBP18.24■□□□□ 0.51
MCF2L-203ENST00000375604 IMPG1Q17R60 797 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 ANKRD20A4Q4UJ75 823 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 ANKRD20A8PQ5CZ79 823 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 ANKRD20A2Q5SQ80 823 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 BEND6Q5SZJ8 279 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-203ENST00000375604 ANKRD20A1Q5TYW2 823 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 C12orf60Q5U649 245 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 FBXO38Q6PIJ6 1188 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 ANP32DO95626 131 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 ESRRAP11474 423 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-203ENST00000375604 GGCXP38435 758 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 TAF1BQ53T94 588 aaPredicted RBP18.24■□□□□ 0.51
MCF2L-203ENST00000375604 STK36Q9NRP7 1315 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 PDIA2Q13087 525 aaKnown RBP18.24■□□□□ 0.51
MCF2L-203ENST00000375604 ARL4CP56559 192 aa18.24■□□□□ 0.51
MCF2L-203ENST00000375604 ROR1Q01973 937 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms