RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 IGSF21Q96ID5 467 aa15.85■□□□□ 0.13
NELFE-201ENST00000375425 PHF7Q9BWX1 381 aaPredicted RBP15.85■□□□□ 0.13
NELFE-201ENST00000375425 GBP3Q9H0R5 595 aa15.85■□□□□ 0.13
NELFE-201ENST00000375425 S1PR5Q9H228 398 aa15.85■□□□□ 0.13
NELFE-201ENST00000375425 DNAJB4Q9UDY4 337 aa15.85■□□□□ 0.13
NELFE-201ENST00000375425 MUTYHQ9UIF7 546 aa15.85■□□□□ 0.13
NELFE-201ENST00000375425 HCN4Q9Y3Q4 1203 aa15.85■□□□□ 0.13
NELFE-201ENST00000375425 LOC730098B7Z3J9 87 aa15.84■□□□□ 0.13
NELFE-201ENST00000375425 ERLIN2O94905 339 aa15.84■□□□□ 0.13
NELFE-201ENST00000375425 SPATA31C1P0DKV0 1188 aa15.84■□□□□ 0.13
NELFE-201ENST00000375425 XRCC6P12956 609 aaKnown RBP eCLIP15.84■□□□□ 0.13
NELFE-201ENST00000375425 CA8P35219 290 aa15.84■□□□□ 0.13
NELFE-201ENST00000375425 ARL2P36404 184 aa15.84■□□□□ 0.13
NELFE-201ENST00000375425 POU5F1BQ06416 359 aa15.84■□□□□ 0.13
NELFE-201ENST00000375425 HERC4Q5GLZ8 1057 aaPredicted RBP15.84■□□□□ 0.13
NELFE-201ENST00000375425 SYCE2Q6PIF2 218 aa15.84■□□□□ 0.13
NELFE-201ENST00000375425 ASAP3Q8TDY4 903 aa15.84■□□□□ 0.13
NELFE-201ENST00000375425 SUSD6Q92537 303 aa15.84■□□□□ 0.13
NELFE-201ENST00000375425 ZSCAN31Q96LW9 406 aaPredicted RBP15.84■□□□□ 0.13
NELFE-201ENST00000375425 CCDC43Q96MW1 224 aaKnown RBP15.84■□□□□ 0.13
NELFE-201ENST00000375425 RSAD1Q9HA92 442 aa15.84■□□□□ 0.13
NELFE-201ENST00000375425 CARNS1A5YM72 827 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 INO80B-WBP1J3KQ70 363 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 CLASP2O75122 1294 aaKnown RBP15.83■□□□□ 0.12
NELFE-201ENST00000375425 DDHD2O94830 711 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 NCLP19338 710 aaKnown RBP15.83■□□□□ 0.12
NELFE-201ENST00000375425 SLC11A1P49279 550 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 NCBP1Q09161 790 aaKnown RBP15.83■□□□□ 0.12
NELFE-201ENST00000375425 TFDP1Q14186 410 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 PCBP1Q15365 356 aaKnown RBP eCLIP15.83■□□□□ 0.12
NELFE-201ENST00000375425 ZNF174Q15697 407 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 DDX53Q86TM3 631 aaKnown RBP15.83■□□□□ 0.12
NELFE-201ENST00000375425 CATSPER3Q86XQ3 398 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 SMG8Q8ND04 991 aaKnown RBP15.83■□□□□ 0.12
NELFE-201ENST00000375425 URGCPQ8TCY9 931 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 CPB2Q96IY4 423 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 RPGRIP1Q96KN7 1286 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 KIF2CQ99661 725 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 APOL5Q9BWW9 433 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 FOXP1Q9H334 677 aaPredicted RBP15.83■□□□□ 0.12
NELFE-201ENST00000375425 HCFC2Q9Y5Z7 792 aa15.83■□□□□ 0.12
NELFE-201ENST00000375425 B4GALT3O60512 393 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 TSPAN1O60635 241 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 POMCP01189 267 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 ALDH2P05091 517 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 HOXB8P17481 243 aaPredicted RBP15.82■□□□□ 0.12
NELFE-201ENST00000375425 GLRA2P23416 452 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 AXLP30530 894 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 CAPSQ13938 189 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 CBX2Q14781 532 aaPredicted RBP15.82■□□□□ 0.12
NELFE-201ENST00000375425 NOTUMQ6P988 496 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 MAEAQ7L5Y9 396 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 IFNLR1Q8IU57 520 aaPredicted RBP15.82■□□□□ 0.12
NELFE-201ENST00000375425 TMEM87AQ8NBN3 555 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 CNNM3Q8NE01 707 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 FBXO18Q8NFZ0 1043 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 BCL7CQ8WUZ0 217 aaPredicted RBP15.82■□□□□ 0.12
NELFE-201ENST00000375425 AUTS2Q8WXX7 1259 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 CASP10Q92851 521 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 FAM193BQ96PV7 902 aaPredicted RBP15.82■□□□□ 0.12
NELFE-201ENST00000375425 EIF2AQ9BY44 585 aaKnown RBP15.82■□□□□ 0.12
NELFE-201ENST00000375425 ZBP1Q9H171 429 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 UBN1Q9NPG3 1134 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 KANSL3Q9P2N6 904 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 IPPQ9Y573 584 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 CNTNAP2Q9UHC6 1331 aa15.82■□□□□ 0.12
NELFE-201ENST00000375425 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.81■□□□□ 0.12
NELFE-201ENST00000375425 MED24O75448 989 aa15.81■□□□□ 0.12
NELFE-201ENST00000375425 CTSAP10619 480 aa15.81■□□□□ 0.12
NELFE-201ENST00000375425 ITGA4P13612 1032 aa15.81■□□□□ 0.12
NELFE-201ENST00000375425 RBM25P49756 843 aaKnown RBP15.81■□□□□ 0.12
NELFE-201ENST00000375425 HMGN5P82970 282 aaKnown RBP15.81■□□□□ 0.12
NELFE-201ENST00000375425 MBTD1Q05BQ5 628 aa15.81■□□□□ 0.12
NELFE-201ENST00000375425 AMHR2Q16671 573 aa15.81■□□□□ 0.12
NELFE-201ENST00000375425 C8orf34Q49A92 452 aa15.81■□□□□ 0.12
NELFE-201ENST00000375425 FAM184AQ8NB25 1140 aa15.81■□□□□ 0.12
NELFE-201ENST00000375425 FAM122AQ96E09 287 aa15.81■□□□□ 0.12
NELFE-201ENST00000375425 RNF39Q9H2S5 420 aa15.81■□□□□ 0.12
NELFE-201ENST00000375425 TUFT1Q9NNX1 390 aa15.81■□□□□ 0.12
NELFE-201ENST00000375425 SH2B1Q9NRF2 756 aaPredicted RBP15.81■□□□□ 0.12
NELFE-201ENST00000375425 ARIH1Q9Y4X5 557 aaPredicted RBP15.81■□□□□ 0.12
NELFE-201ENST00000375425 IRAK3Q9Y616 596 aa15.81■□□□□ 0.12
NELFE-201ENST00000375425 NRP1O14786 923 aa15.8■□□□□ 0.12
NELFE-201ENST00000375425 USO1O60763 962 aaKnown RBP15.8■□□□□ 0.12
NELFE-201ENST00000375425 ARF4P18085 180 aaPredicted RBP15.8■□□□□ 0.12
NELFE-201ENST00000375425 PLA2G5P39877 138 aa15.8■□□□□ 0.12
NELFE-201ENST00000375425 GIT2Q14161 759 aa15.8■□□□□ 0.12
NELFE-201ENST00000375425 EDAQ92838 391 aa15.8■□□□□ 0.12
NELFE-201ENST00000375425 CCDC51Q96ER9 411 aa15.8■□□□□ 0.12
NELFE-201ENST00000375425 NACC1Q96RE7 527 aa15.8■□□□□ 0.12
NELFE-201ENST00000375425 POLR3CQ9BUI4 534 aaPredicted RBP15.8■□□□□ 0.12
NELFE-201ENST00000375425 NFKBIZQ9BYH8 718 aa15.8■□□□□ 0.12
NELFE-201ENST00000375425 CSRNP2Q9H175 543 aa15.8■□□□□ 0.12
NELFE-201ENST00000375425 POLR3FQ9H1D9 316 aaPredicted RBP15.8■□□□□ 0.12
NELFE-201ENST00000375425 GPRC5CQ9NQ84 441 aa15.8■□□□□ 0.12
NELFE-201ENST00000375425 FAN1Q9Y2M0 1017 aa15.8■□□□□ 0.12
NELFE-201ENST00000375425 HES2Q9Y543 173 aa15.8■□□□□ 0.12
NELFE-201ENST00000375425 ARL5CA6NH57 179 aa15.79■□□□□ 0.12
NELFE-201ENST00000375425 B4GALT5O43286 388 aa15.79■□□□□ 0.12
NELFE-201ENST00000375425 OR52Z1P0C646 297 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms