RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 VPS72Q15906 364 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 MUM1L1Q5H9M0 696 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 SNRNP48Q6IEG0 339 aaKnown RBP12.5□□□□□ -0.41
COPA-202ENST00000368069 LRIG3Q6UXM1 1119 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 TMEM35BQ8NCS4 154 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 SMC1BQ8NDV3 1235 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 ZNF473Q8WTR7 871 aaKnown RBP12.5□□□□□ -0.41
COPA-202ENST00000368069 CCT8L2Q96SF2 557 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 APOL6Q9BWW8 343 aa12.5□□□□□ -0.41
COPA-202ENST00000368069 RTFDC1Q9BY42 306 aaPredicted RBP12.5□□□□□ -0.41
COPA-202ENST00000368069 BRAFP15056 766 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 CAV1Q03135 178 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 CDKL2Q92772 493 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 NLRP4Q96MN2 994 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 PPP1R16BQ96T49 567 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 BCL9O00512 1426 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 TLR3O15455 904 aaKnown RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 YWHABP31946 246 aaKnown RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 PDE1BQ01064 536 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 EZH2Q15910 746 aaKnown RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 AFAP1L2Q8N4X5 818 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 CELF4Q9BZC1 486 aaKnown RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 CLDN3O15551 220 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 MED24O75448 989 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 SLC12A2P55011 1212 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 KRT17Q04695 432 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 SURF1Q15526 300 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 STRIP1Q5VSL9 837 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 LMBRD2Q68DH5 695 aaPredicted RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 KIAA0895Q8NCT3 520 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 RAB3IL1Q8TBN0 382 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 MEFVO15553 781 aaPredicted RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 PRPSAP2O60256 369 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 CRCPO75575 148 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 SASH3O75995 380 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 GNA15P30679 374 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 LSP1P33241 339 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 GCKP35557 465 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 SPARCL1Q14515 664 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 GBP7Q8N8V2 638 aaPredicted RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 GABPB2Q8TAK5 448 aaPredicted RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 NSUN6Q8TEA1 469 aaKnown RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 HSPH1Q92598 858 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 FAM149B1Q96BN6 582 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 CFAP36Q96G28 342 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 SNF8Q96H20 258 aa12.49□□□□□ -0.41
COPA-202ENST00000368069 GJD4Q96KN9 370 aaPredicted RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 POLR3FQ9H1D9 316 aaPredicted RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 DMGDHQ9UI17 866 aaKnown RBP12.49□□□□□ -0.41
COPA-202ENST00000368069 CHUKO15111 745 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 EPM2AIP1Q7L775 607 aaPredicted RBP12.48□□□□□ -0.41
COPA-202ENST00000368069 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 SYT2Q8N9I0 419 aaPredicted RBP12.48□□□□□ -0.41
COPA-202ENST00000368069 PACSIN1Q9BY11 444 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 ISCUQ9H1K1 167 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 GOLGA8MH3BSY2 632 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 PHF2O75151 1096 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 TMEM253P0C7T8 217 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 HP1BP3Q5SSJ5 553 aaPredicted RBP12.48□□□□□ -0.41
COPA-202ENST00000368069 GPD1LQ8N335 351 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 SLC30A5Q8TAD4 765 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 HEXIM2Q96MH2 286 aaKnown RBP12.48□□□□□ -0.41
COPA-202ENST00000368069 RPF1Q9H9Y2 349 aaKnown RBP12.48□□□□□ -0.41
COPA-202ENST00000368069 ZNF446Q9NWS9 450 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 UBR1Q8IWV7 1749 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 JCADQ9P266 1359 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 EIF3DO15371 548 aaKnown RBP eCLIP12.48□□□□□ -0.41
COPA-202ENST00000368069 SSTR3P32745 418 aaPredicted RBP12.48□□□□□ -0.41
COPA-202ENST00000368069 PSMD6Q15008 389 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 CASKIN2Q8WXE0 1202 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 DUSP9Q99956 384 aaKnown RBP12.48□□□□□ -0.41
COPA-202ENST00000368069 NAGPAQ9UK23 515 aa12.48□□□□□ -0.41
COPA-202ENST00000368069 RSPH10B2B2RC85 870 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 MAPK13O15264 365 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 LUC7L3O95232 432 aaKnown RBP12.47□□□□□ -0.41
COPA-202ENST00000368069 CALB1P05937 261 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 RSPH10BP0C881 870 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 SAT1P21673 171 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 PPP2R5CQ13362 524 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 BYSLQ13895 437 aaKnown RBP12.47□□□□□ -0.41
COPA-202ENST00000368069 CDO1Q16878 200 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 PDZD4Q76G19 769 aaPredicted RBP12.47□□□□□ -0.41
COPA-202ENST00000368069 TRIM42Q8IWZ5 723 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 RHOT1Q8IXI2 618 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 C7orf31Q8N865 590 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 RUSC1Q9BVN2 902 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 ZNF277Q9NRM2 450 aaPredicted RBP12.47□□□□□ -0.41
COPA-202ENST00000368069 A0A0U1RQJ8 604 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 WTIPA6NIX2 430 aaPredicted RBP12.47□□□□□ -0.41
COPA-202ENST00000368069 MSH4O15457 936 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 PRLRP16471 622 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 ARL4CP56559 192 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 SPP2Q13103 211 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 ZNF667Q5HYK9 610 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 KNDC1Q76NI1 1749 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 CYFIP1Q7L576 1253 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 ENOSF1Q7L5Y1 443 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 SLC4A9Q96Q91 983 aa12.47□□□□□ -0.41
COPA-202ENST00000368069 MTRQ99707 1265 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms