RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 WASHC5Q12768 1159 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PUM1Q14671 1186 aaKnown RBP eCLIP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PUM3Q15397 648 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 CCDC85BQ15834 202 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 C5orf22Q49AR2 442 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 TMEM177Q53S58 311 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 TAF2Q6P1X5 1199 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 USHBP1Q8N6Y0 703 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 FNIP1Q8TF40 1166 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 RABGGTAQ92696 567 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 ZDHHC15Q96MV8 337 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PPP1R1BQ9UD71 204 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 VPS51Q9UID3 782 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 SCAF8Q9UPN6 1271 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 TAF1P21675 1872 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 MEGF11A6BM72 1044 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PLSCR1O15162 318 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 EFCAB14O75071 495 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 FLT3LGP49771 235 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 ALDH3A2P51648 485 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PPP5CP53041 499 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 CHRNDQ07001 517 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 POSTNQ15063 836 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 CATSPERGQ6ZRH7 1159 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 CARNMT1Q8N4J0 409 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 IL17RDQ8NFM7 739 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 SLC5A11Q8WWX8 675 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 ARSGQ96EG1 525 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 APIPQ96GX9 242 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 CRACR2AQ9BSW2 395 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 CD244Q9BZW8 370 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 ABCG4Q9H172 646 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PRDM8Q9NQV8 689 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PARP14Q460N5 1801 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 KHNYNO15037 678 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 FBXO24O75426 580 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 CTAG2O75638 210 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 TBX18O95935 607 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 RAD23AP54725 363 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 FAM193AP78312 1265 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 GPLD1P80108 840 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 MRPS9P82933 396 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 ADORA2A-AS1P86434 159 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PRR20EP86478 221 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PRR20CP86479 221 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PRR20DP86480 221 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PRR20BP86481 221 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PRR20AP86496 221 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 SEMA3AQ14563 771 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 TRIM71Q2Q1W2 868 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 EMC4Q5J8M3 183 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 MAEAQ7L5Y9 396 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 NLRP10Q86W26 655 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PTRH1Q86Y79 214 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 IPO4Q8TEX9 1081 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 USP13Q92995 863 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 HSPBAP1Q96EW2 488 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 TMEM169Q96HH4 297 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 ZSWIM3Q96MP5 696 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 SAMD11Q96NU1 681 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 CARD10Q9BWT7 1032 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 BRF2Q9HAW0 419 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 NECTIN3Q9NQS3 549 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 DCAF16Q9NXF7 216 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 NSMCE4AQ9NXX6 385 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 SLC12A7Q9Y666 1083 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 CENPFP49454 3210 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 CCDC151A5D8V7 595 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 KPNA7A9QM74 516 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 SOX1O00570 391 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 H2AFYO75367 372 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 KLHL18O94889 574 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 C4BPAP04003 597 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 RPL17P18621 184 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 IL13P35225 146 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 ERVK-24P63145 666 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 ZMYM1Q5SVZ6 1142 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 VPS53Q5VIR6 699 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 ZNF619Q8N2I2 560 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 C7orf26Q96N11 449 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 G6PC3Q9BUM1 346 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PIH1D1Q9NWS0 290 aaKnown RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 NFKBIL1Q9UBC1 381 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 SLCO3A1Q9UIG8 710 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 PCDHB10Q9UN67 800 aa2.26□□□□□ -2.05
SMARCAD1-202ENST00000359052 WDFY3Q8IZQ1 3526 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 FER1L6Q2WGJ9 1857 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 ANKRD31Q8N7Z5 1873 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 BLACEA4D250 179 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 TMEM110-MUSTN1A8MSY1 372 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 EPHX1P07099 455 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 INSRRP14616 1297 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 TRPC1P48995 793 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 VAMP2P63027 116 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 ATP11AP98196 1134 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 CCDC142Q17RM4 750 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 DSTYKQ6XUX3 929 aa2.25□□□□□ -2.05
SMARCAD1-202ENST00000359052 MSL3Q8N5Y2 521 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms