RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PCDHA4Q9UN74 947 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 LAMC2Q13753 1193 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 CTTNQ14247 550 aaKnown RBP17.37■□□□□ 0.37
PTCH1-201ENST00000331920 NCOA1Q15788 1441 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 ST13P5Q8NFI4 369 aaPredicted RBP17.37■□□□□ 0.37
PTCH1-201ENST00000331920 SNX24Q9Y343 169 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 UBE2SQ16763 222 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 ZNF658Q5TYW1 1059 aaPredicted RBP17.37■□□□□ 0.37
PTCH1-201ENST00000331920 C11orf88Q6PI97 169 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 BNIPLQ7Z465 357 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 HS6ST3Q8IZP7 471 aa17.37■□□□□ 0.37
PTCH1-201ENST00000331920 DEFA1P59665 94 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 DEFA3P59666 94 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 THNSL1Q8IYQ7 743 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 ZC3H4Q9UPT8 1303 aaKnown RBP17.36■□□□□ 0.37
PTCH1-201ENST00000331920 TRIM13O60858 407 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 KRT78Q8N1N4 520 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 ZNF668Q96K58 619 aaPredicted RBP17.36■□□□□ 0.37
PTCH1-201ENST00000331920 SPRTNQ9H040 489 aaPredicted RBP17.36■□□□□ 0.37
PTCH1-201ENST00000331920 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 SPATA2Q9UM82 520 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 TEX28O15482 410 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 FYNP06241 537 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 ENO3P13929 434 aaPredicted RBP17.36■□□□□ 0.37
PTCH1-201ENST00000331920 PLOD1Q02809 727 aaPredicted RBP17.36■□□□□ 0.37
PTCH1-201ENST00000331920 PDAP1Q13442 181 aaKnown RBP17.36■□□□□ 0.37
PTCH1-201ENST00000331920 KRT39Q6A163 491 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 ABCB6Q9NP58 842 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 CYP26B1Q9NR63 512 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 LCP1P13796 627 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 ARFIP2P53365 341 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 PPP1R2P3Q6NXS1 205 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 MAGEB10Q96LZ2 347 aaPredicted RBP17.36■□□□□ 0.37
PTCH1-201ENST00000331920 TBC1D23Q9NUY8 699 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 MAN1B1Q9UKM7 699 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 SARM1Q6SZW1 724 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 ASNSD1Q9NWL6 643 aa17.36■□□□□ 0.37
PTCH1-201ENST00000331920 MRPL39Q9NYK5 338 aaKnown RBP17.36■□□□□ 0.37
PTCH1-201ENST00000331920 ATP6V1C1P21283 382 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 PSMC6P62333 389 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 IFNEQ86WN2 208 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 ENO4A6NNW6 628 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 DHTKD1Q96HY7 919 aaPredicted RBP17.35■□□□□ 0.37
PTCH1-201ENST00000331920 NAALADL2Q58DX5 795 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 RSPH10B2B2RC85 870 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 RSPH10BP0C881 870 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 ADORA2BP29275 332 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 KRT84Q9NSB2 600 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 HUS1O60921 280 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 HIC1Q14526 733 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 GCOM2Q9BZD3 368 aaPredicted RBP17.35■□□□□ 0.37
PTCH1-201ENST00000331920 PODXLO00592 558 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 RNASE11Q8TAA1 199 aaKnown RBP17.35■□□□□ 0.37
PTCH1-201ENST00000331920 PGBD4Q96DM1 585 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 TSSK1BQ9BXA7 367 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 ADAM22Q9P0K1 906 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 CD109Q6YHK3 1445 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 ADCY9O60503 1353 aa17.35■□□□□ 0.37
PTCH1-201ENST00000331920 XPO1O14980 1071 aaKnown RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 PSMA3P25788 255 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 TYK2P29597 1187 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 RPS8P62241 208 aaKnown RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 ARF5P84085 180 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 SCRN1Q12765 414 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 USP39Q53GS9 565 aaKnown RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 DGKHQ86XP1 1220 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 RNF25Q96BH1 459 aaPredicted RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 VPS50Q96JG6 964 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 ETNK1Q9HBU6 452 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 DARSP14868 501 aaKnown RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 FEN1P39748 380 aaKnown RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 ROR1Q01973 937 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 INAQ16352 499 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 ZBED8Q8IZ13 594 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 PIGOQ8TEQ8 1089 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 FOPNLQ96NB1 174 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 ACAP3Q96P50 834 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 CYP19A1P11511 503 aaPredicted RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 TP53BP2Q13625 1128 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 ZNF667Q5HYK9 610 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 CAPRIN2Q6IMN6 1127 aaKnown RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 TMEM270Q6UE05 265 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 FLT4P35916 1363 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 PHLPP2Q6ZVD8 1323 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 ADGRL1O94910 1474 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 RALBP11234 206 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 FKBP3Q00688 224 aaKnown RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 ZNF235Q14590 738 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 ADAM33Q9BZ11 813 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 PKP3Q9Y446 797 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 CNBD2Q96M20 576 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 POTEFA5A3E0 1075 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 M0R3G1 203 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 PLA2G4BP0C869 781 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 BTKQ06187 659 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 KLHL38Q2WGJ6 581 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 TMEM154Q6P9G4 183 aa17.34■□□□□ 0.37
PTCH1-201ENST00000331920 CCDC60Q8IWA6 550 aaPredicted RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 NARS2Q96I59 477 aaKnown RBP17.34■□□□□ 0.37
PTCH1-201ENST00000331920 EYA1Q99502 592 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms