RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 ZNF668Q96K58 619 aaPredicted RBP17.46■□□□□ 0.39
BRD3-201ENST00000303407 APEX2Q9UBZ4 518 aa17.46■□□□□ 0.39
BRD3-201ENST00000303407 PRR12Q9ULL5 1215 aa17.46■□□□□ 0.39
BRD3-201ENST00000303407 LUC7L3O95232 432 aaKnown RBP17.46■□□□□ 0.39
BRD3-201ENST00000303407 TROAPQ12815 778 aa17.46■□□□□ 0.39
BRD3-201ENST00000303407 MMP19Q99542 508 aa17.46■□□□□ 0.39
BRD3-201ENST00000303407 TLK1Q9UKI8 766 aa17.46■□□□□ 0.39
BRD3-201ENST00000303407 RASA4BC9J798 803 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 RASA4O43374 803 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 GGPS1O95749 300 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 FDX1P10109 184 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 ARL13BQ3SXY8 428 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 BEND6Q5SZJ8 279 aaPredicted RBP17.45■□□□□ 0.38
BRD3-201ENST00000303407 BBS5Q8N3I7 341 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 SNF8Q96H20 258 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 TTC7AQ9ULT0 858 aaPredicted RBP17.45■□□□□ 0.38
BRD3-201ENST00000303407 ENTPD3O75355 529 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 RAB44Q7Z6P3 723 aaPredicted RBP17.45■□□□□ 0.38
BRD3-201ENST00000303407 ATP6V1G3Q96LB4 118 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 STK33Q9BYT3 514 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 NBPF3Q9H094 633 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 JPH1Q9HDC5 661 aaPredicted RBP17.45■□□□□ 0.38
BRD3-201ENST00000303407 SSU72P8A0A1W2PR75 194 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 GPC4O75487 556 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 MAML1Q92585 1016 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 TIPINQ9BVW5 301 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 SLC12A6Q9UHW9 1150 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 ARPP19P56211 112 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 LMBRD2Q68DH5 695 aaPredicted RBP17.45■□□□□ 0.38
BRD3-201ENST00000303407 SLC35G2Q8TBE7 412 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 SPATA33Q96N06 139 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 UCHL3P15374 230 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 FMO5P49326 533 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 SPARCL1Q14515 664 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 DBN1Q16643 649 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 BZW1Q7L1Q6 419 aaKnown RBP17.45■□□□□ 0.38
BRD3-201ENST00000303407 EPM2AIP1Q7L775 607 aaPredicted RBP17.45■□□□□ 0.38
BRD3-201ENST00000303407 MIPOL1Q8TD10 442 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 C1orf54Q8WWF1 131 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 ANKRD7Q92527 254 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 RNPC3Q96LT9 517 aaKnown RBP17.45■□□□□ 0.38
BRD3-201ENST00000303407 TUBB6Q9BUF5 446 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 FBXL5Q9UKA1 691 aa17.45■□□□□ 0.38
BRD3-201ENST00000303407 ZBTB7AO95365 584 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 RPSAP08865 295 aaKnown RBP17.44■□□□□ 0.38
BRD3-201ENST00000303407 SEPT6Q14141 434 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 DCLK2Q8N568 766 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 PITPNM3Q9BZ71 974 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 Q9H521 79 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 ZNF70Q9UC06 446 aaPredicted RBP17.44■□□□□ 0.38
BRD3-201ENST00000303407 AMACRQ9UHK6 382 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 DHX34Q14147 1143 aaKnown RBP17.44■□□□□ 0.38
BRD3-201ENST00000303407 TTLL4Q14679 1199 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 ZNF449Q6P9G9 518 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 RHOT1Q8IXI2 618 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 MCUQ8NE86 351 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 THOC1Q96FV9 657 aaKnown RBP17.44■□□□□ 0.38
BRD3-201ENST00000303407 TTC25Q96NG3 672 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 MAPK13O15264 365 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 S100BP04271 92 aaPredicted RBP17.44■□□□□ 0.38
BRD3-201ENST00000303407 FGFR2P21802 821 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 HMGCS2P54868 508 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 PSMC1P62191 440 aaKnown RBP17.44■□□□□ 0.38
BRD3-201ENST00000303407 ATG16L1Q676U5 607 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 TRIM72Q6ZMU5 477 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 GOLGA8QA0A0J9YX86 632 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 GOLGA8OA6NCC3 632 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 GOLGA8CPA6NN73 597 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 GOLGA8NF8WBI6 632 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 TOB1P50616 345 aaPredicted RBP17.44■□□□□ 0.38
BRD3-201ENST00000303407 C4orf50Q6ZRC1 276 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 CPSF2Q9P2I0 782 aaKnown RBP17.44■□□□□ 0.38
BRD3-201ENST00000303407 PCSK1NQ9UHG2 260 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 LRFN2Q9ULH4 789 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 FHOD1Q9Y613 1164 aa17.44■□□□□ 0.38
BRD3-201ENST00000303407 KRT14P02533 472 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 RBM43Q6ZSC3 357 aaKnown RBP17.43■□□□□ 0.38
BRD3-201ENST00000303407 TRIM59Q8IWR1 403 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 HEY1Q9Y5J3 304 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 FRMD3A2A2Y4 597 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 ANKRD65E5RJM6 399 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 WDR46O15213 610 aaKnown RBP17.43■□□□□ 0.38
BRD3-201ENST00000303407 JADE1Q6IE81 842 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 LRGUKQ96M69 825 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 DDX56Q9NY93 547 aaKnown RBP17.43■□□□□ 0.38
BRD3-201ENST00000303407 CD44P16070 742 aaKnown RBP17.43■□□□□ 0.38
BRD3-201ENST00000303407 TFDP2Q14188 446 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 NYAP1Q6ZVC0 841 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 PDCD7Q8N8D1 485 aaKnown RBP17.43■□□□□ 0.38
BRD3-201ENST00000303407 SH2D3AQ9BRG2 576 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 PARVAQ9NVD7 372 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.43■□□□□ 0.38
BRD3-201ENST00000303407 SLC37A4O43826 429 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 EDRF1Q3B7T1 1238 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 ZC2HC1CQ53FD0 456 aaPredicted RBP17.43■□□□□ 0.38
BRD3-201ENST00000303407 FIS1Q9Y3D6 152 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 PSMD14O00487 310 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 KRT3P12035 628 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 ANXA13P27216 316 aa17.43■□□□□ 0.38
BRD3-201ENST00000303407 HIBCHQ6NVY1 386 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms