RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SLC4A7Q9Y6M7 1214 aa5.88□□□□□ -1.47
CCDC54-201ENST00000261058 PMS2P1A4D2B8 440 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 DBX1A6NMT0 343 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 PRPF3O43395 683 aaKnown RBP5.87□□□□□ -1.47
CCDC54-201ENST00000261058 B4GALT3O60512 393 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 LPOP22079 712 aaPredicted RBP5.87□□□□□ -1.47
CCDC54-201ENST00000261058 EDNRBP24530 442 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 CYP2C19P33261 490 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 MEOX1P50221 254 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 CCT2P78371 535 aaKnown RBP5.87□□□□□ -1.47
CCDC54-201ENST00000261058 GTF2H3Q13889 308 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 USP30Q70CQ3 517 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 EPM2AIP1Q7L775 607 aaPredicted RBP5.87□□□□□ -1.47
CCDC54-201ENST00000261058 GPR155Q7Z3F1 870 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 RALYLQ86SE5 291 aaKnown RBP5.87□□□□□ -1.47
CCDC54-201ENST00000261058 TPH2Q8IWU9 490 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 LRRC56Q8IYG6 542 aaPredicted RBP5.87□□□□□ -1.47
CCDC54-201ENST00000261058 PRR18Q8N4B5 295 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.87□□□□□ -1.47
CCDC54-201ENST00000261058 CFHR4Q92496 578 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 SLC7A6OSQ96CW6 309 aaPredicted RBP5.87□□□□□ -1.47
CCDC54-201ENST00000261058 CSRNP2Q9H175 543 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 SLC12A5Q9H2X9 1139 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 JADE2Q9NQC1 790 aa5.87□□□□□ -1.47
CCDC54-201ENST00000261058 RBM12Q9NTZ6 932 aaKnown RBP5.87□□□□□ -1.47
CCDC54-201ENST00000261058 RPTORQ8N122 1335 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 TRIM13O60858 407 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 U2AF1L5P0DN76 240 aaPredicted RBP5.86□□□□□ -1.47
CCDC54-201ENST00000261058 KIR2DL3P43628 341 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 ADCY7P51828 1080 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 WNT3AP56704 352 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 U2AF1Q01081 240 aaKnown RBP eCLIP5.86□□□□□ -1.47
CCDC54-201ENST00000261058 KIAA2012Q0VF49 1180 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 MST1LQ2TV78 715 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 GAGE13Q4V321 117 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 B3GNT9Q6UX72 402 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 ABHD15Q6UXT9 468 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 KBTBD2Q8IY47 623 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 MYO1HQ8N1T3 1032 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 MSL3Q8N5Y2 521 aaKnown RBP5.86□□□□□ -1.47
CCDC54-201ENST00000261058 PLA2G15Q8NCC3 412 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 GPR156Q8NFN8 814 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 SNX33Q8WV41 574 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 C14orf93Q9H972 538 aaKnown RBP5.86□□□□□ -1.47
CCDC54-201ENST00000261058 DMRT3Q9NQL9 472 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 LIMCH1Q9UPQ0 1083 aa5.86□□□□□ -1.47
CCDC54-201ENST00000261058 ARHGAP6O43182 974 aa5.85□□□□□ -1.47
CCDC54-201ENST00000261058 HTRA2O43464 458 aaPredicted RBP5.85□□□□□ -1.47
CCDC54-201ENST00000261058 IL33O95760 270 aa5.85□□□□□ -1.47
CCDC54-201ENST00000261058 POU2F2P09086 479 aa5.85□□□□□ -1.47
CCDC54-201ENST00000261058 KCNC1P48547 511 aa5.85□□□□□ -1.47
CCDC54-201ENST00000261058 SLC16A1P53985 500 aa5.85□□□□□ -1.47
CCDC54-201ENST00000261058 UBE3CQ15386 1083 aa5.85□□□□□ -1.47
CCDC54-201ENST00000261058 MIER2Q8N344 545 aa5.85□□□□□ -1.47
CCDC54-201ENST00000261058 LILRA3Q8N6C8 439 aaPredicted RBP5.85□□□□□ -1.47
CCDC54-201ENST00000261058 OR2I1PQ8NGU4 316 aa5.85□□□□□ -1.47
CCDC54-201ENST00000261058 RIN2Q8WYP3 895 aaPredicted RBP5.85□□□□□ -1.47
CCDC54-201ENST00000261058 SLC6A15Q9H2J7 730 aa5.85□□□□□ -1.47
CCDC54-201ENST00000261058 MSL2Q9HCI7 577 aa5.85□□□□□ -1.47
CCDC54-201ENST00000261058 ZDHHC9Q9Y397 364 aa5.85□□□□□ -1.47
CCDC54-201ENST00000261058 MATN2O00339 956 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 DAPK3O43293 454 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 PHF2O75151 1096 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 CNOT4O95628 575 aaKnown RBP5.84□□□□□ -1.47
CCDC54-201ENST00000261058 RRADP55042 308 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 GJA9P57773 515 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 KIF23Q02241 960 aaPredicted RBP5.84□□□□□ -1.47
CCDC54-201ENST00000261058 TCIRG1Q13488 830 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 SEPT2Q15019 361 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 RNF151Q2KHN1 245 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 ATAT1Q5SQI0 421 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 CCDC181Q5TID7 509 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 Q6ZVL8 140 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 FAM124AQ86V42 546 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 SP8Q8IXZ3 490 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 PPM1NQ8N819 430 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 MARCH10Q8NA82 808 aaPredicted RBP5.84□□□□□ -1.47
CCDC54-201ENST00000261058 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.84□□□□□ -1.47
CCDC54-201ENST00000261058 TTC8Q8TAM2 541 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 NRG4Q8WWG1 115 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 UIMC1Q96RL1 719 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 ANLNQ9NQW6 1124 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 ZBTB21Q9ULJ3 1066 aa5.84□□□□□ -1.47
CCDC54-201ENST00000261058 FAM171A2A8MVW0 826 aa5.83□□□□□ -1.48
CCDC54-201ENST00000261058 ALDH1A2O94788 518 aa5.83□□□□□ -1.48
CCDC54-201ENST00000261058 TOX4O94842 621 aa5.83□□□□□ -1.48
CCDC54-201ENST00000261058 CT47B1P0C2W7 299 aaPredicted RBP5.83□□□□□ -1.48
CCDC54-201ENST00000261058 VSIG10L2P0DP72 767 aa5.83□□□□□ -1.48
CCDC54-201ENST00000261058 SLC6A9P48067 706 aa5.83□□□□□ -1.48
CCDC54-201ENST00000261058 MLC1Q15049 377 aa5.83□□□□□ -1.48
CCDC54-201ENST00000261058 LILRA6Q6PI73 481 aa5.83□□□□□ -1.48
CCDC54-201ENST00000261058 SIAH1Q8IUQ4 282 aa5.83□□□□□ -1.48
CCDC54-201ENST00000261058 KCNC2Q96PR1 638 aa5.83□□□□□ -1.48
CCDC54-201ENST00000261058 ADI1Q9BV57 179 aa5.83□□□□□ -1.48
CCDC54-201ENST00000261058 GTPBP4Q9BZE4 634 aaKnown RBP5.83□□□□□ -1.48
CCDC54-201ENST00000261058 ENKD1Q9H0I2 346 aa5.83□□□□□ -1.48
CCDC54-201ENST00000261058 GEMIN8Q9NWZ8 242 aaKnown RBP5.83□□□□□ -1.48
CCDC54-201ENST00000261058 RBM8AQ9Y5S9 174 aaKnown RBP5.83□□□□□ -1.48
CCDC54-201ENST00000261058 JUNP05412 331 aaKnown RBP5.82□□□□□ -1.48
CCDC54-201ENST00000261058 GSPT1P15170 499 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms