RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 MAFAQ8NHW3 353 aaPredicted RBP18.84■□□□□ 0.61
LIN28B-202ENST00000635857 ZNF689Q96CS4 500 aaPredicted RBP18.84■□□□□ 0.61
LIN28B-202ENST00000635857 PGBD4Q96DM1 585 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 C17orf80Q9BSJ5 609 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 KCND2Q9NZV8 630 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 SRPRBQ9Y5M8 271 aaKnown RBP18.84■□□□□ 0.61
LIN28B-202ENST00000635857 COL4A4P53420 1690 aaPredicted RBP18.83■□□□□ 0.61
LIN28B-202ENST00000635857 FAM189BP81408 668 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 GRB10Q13322 594 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 SLC39A14Q15043 492 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 TMEM119Q4V9L6 283 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 TMEM192Q8IY95 271 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 RSPH1Q8WYR4 309 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 CCDC51Q96ER9 411 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 PNMA5Q96PV4 448 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 TRIM6Q9C030 488 aaPredicted RBP18.83■□□□□ 0.6
LIN28B-202ENST00000635857 CSRNP2Q9H175 543 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 MINDY3Q9H8M7 445 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 RC3H2Q9HBD1 1191 aaKnown RBP18.83■□□□□ 0.6
LIN28B-202ENST00000635857 AAASQ9NRG9 546 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 FAM105AQ9NUU6 356 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 PRMT7Q9NVM4 692 aaPredicted RBP18.83■□□□□ 0.6
LIN28B-202ENST00000635857 KCNG1Q9UIX4 513 aa18.83■□□□□ 0.6
LIN28B-202ENST00000635857 PHLPP2Q6ZVD8 1323 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 KRT18P05783 430 aaKnown RBP18.82■□□□□ 0.6
LIN28B-202ENST00000635857 PLA2G4BP0C869 781 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 FGFR1P11362 822 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 NASPP49321 788 aaPredicted RBP18.82■□□□□ 0.6
LIN28B-202ENST00000635857 MBTD1Q05BQ5 628 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 DMP1Q13316 513 aaPredicted RBP18.82■□□□□ 0.6
LIN28B-202ENST00000635857 MAPK6Q16659 721 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 FOXD4L6Q3SYB3 417 aaPredicted RBP18.82■□□□□ 0.6
LIN28B-202ENST00000635857 EPC2Q52LR7 807 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 ATL3Q6DD88 541 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 RINT1Q6NUQ1 792 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 FOXD4L3Q6VB84 417 aaPredicted RBP18.82■□□□□ 0.6
LIN28B-202ENST00000635857 HACE1Q8IYU2 909 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 MICALL1Q8N3F8 863 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 CNNM3Q8NE01 707 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 GDPD5Q8WTR4 605 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 PRIMPOLQ96LW4 560 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 C11orf84Q9BUA3 381 aaPredicted RBP18.82■□□□□ 0.6
LIN28B-202ENST00000635857 TRAIPQ9BWF2 469 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 MRPL9Q9BYD2 267 aaKnown RBP18.82■□□□□ 0.6
LIN28B-202ENST00000635857 TMEM117Q9H0C3 514 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 FBXO2Q9UK22 296 aaPredicted RBP18.82■□□□□ 0.6
LIN28B-202ENST00000635857 CFAP45Q9UL16 551 aa18.82■□□□□ 0.6
LIN28B-202ENST00000635857 MORC2Q9Y6X9 1032 aaPredicted RBP18.82■□□□□ 0.6
LIN28B-202ENST00000635857 MYO9BQ13459 2157 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 CCDC169A6NNP5 214 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 SPTLC2O15270 562 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 TSPAN1O60635 241 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 HIP1RO75146 1068 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 YEATS4O95619 227 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 RB1P06400 928 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 LIG1P18858 919 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 PLCG1P19174 1290 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 EFNA5P52803 228 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 KARSQ15046 597 aaKnown RBP18.81■□□□□ 0.6
LIN28B-202ENST00000635857 PTPROQ16827 1216 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 CDCA2Q69YH5 1023 aaPredicted RBP18.81■□□□□ 0.6
LIN28B-202ENST00000635857 KCNK18Q7Z418 384 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 CRIPAKQ8N1N5 446 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 LRRC43Q8N309 656 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 SYT2Q8N9I0 419 aaPredicted RBP18.81■□□□□ 0.6
LIN28B-202ENST00000635857 RUSC1Q9BVN2 902 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 CCSER1Q9C0I3 900 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 C17orf75Q9HAS0 396 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 DAXXQ9UER7 740 aaPredicted RBP18.81■□□□□ 0.6
LIN28B-202ENST00000635857 ATP6V1DQ9Y5K8 247 aa18.81■□□□□ 0.6
LIN28B-202ENST00000635857 FNDC1Q4ZHG4 1894 aaPredicted RBP18.81■□□□□ 0.6
LIN28B-202ENST00000635857 RFXAPO00287 272 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 GUCY2CP25092 1073 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 GATMP50440 423 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 SMTNP53814 917 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 GRIN1Q05586 938 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 GPM6BQ13491 265 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 DHX8Q14562 1220 aaKnown RBP18.8■□□□□ 0.6
LIN28B-202ENST00000635857 GLB1LQ6UWU2 654 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 SPRED2Q7Z698 418 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 LINC00301Q8NCQ3 95 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 KCNG4Q8TDN1 519 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 LARP4BQ92615 738 aaKnown RBP18.8■□□□□ 0.6
LIN28B-202ENST00000635857 SYMPKQ92797 1274 aaKnown RBP18.8■□□□□ 0.6
LIN28B-202ENST00000635857 CLP1Q92989 425 aaKnown RBP18.8■□□□□ 0.6
LIN28B-202ENST00000635857 PLVAPQ9BX97 442 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 TFIP11Q9UBB9 837 aaKnown RBP18.8■□□□□ 0.6
LIN28B-202ENST00000635857 PCDHB12Q9Y5F1 795 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 MRPL42Q9Y6G3 142 aaKnown RBP18.8■□□□□ 0.6
LIN28B-202ENST00000635857 MYH11P35749 1972 aa18.8■□□□□ 0.6
LIN28B-202ENST00000635857 EPOPA6NHQ4 379 aa18.79■□□□□ 0.6
LIN28B-202ENST00000635857 PPP6R2O75170 966 aa18.79■□□□□ 0.6
LIN28B-202ENST00000635857 PRKCBP05771 671 aa18.79■□□□□ 0.6
LIN28B-202ENST00000635857 BMPR1AP36894 532 aa18.79■□□□□ 0.6
LIN28B-202ENST00000635857 PEX3P56589 373 aa18.79■□□□□ 0.6
LIN28B-202ENST00000635857 RAD51AP2Q09MP3 1159 aa18.79■□□□□ 0.6
LIN28B-202ENST00000635857 PRPF4BQ13523 1007 aaKnown RBP18.79■□□□□ 0.6
LIN28B-202ENST00000635857 SPECC1Q5M775 1068 aa18.79■□□□□ 0.6
LIN28B-202ENST00000635857 RRAGBQ5VZM2 374 aa18.79■□□□□ 0.6
LIN28B-202ENST00000635857 SLC27A1Q6PCB7 646 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms