RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 RP1P56715 2156 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 GCLMP48507 274 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 HDAC4P56524 1084 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 RASGRF1Q13972 1273 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 RFX8Q6ZV50 586 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 MIGA2Q7L4E1 593 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 ZNF564Q8TBZ8 553 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-218ENST00000635120 IFT43Q96FT9 208 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 EPAS1Q99814 870 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 BCORL1Q5H9F3 1711 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 E9PMD0 336 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 ZRANB2O95218 330 aaKnown RBP eCLIP9.69□□□□□ -0.86
CSMD1-218ENST00000635120 LARGE1O95461 756 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 CUL4AQ13619 759 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 ZC3H12BQ5HYM0 836 aaKnown RBP9.69□□□□□ -0.86
CSMD1-218ENST00000635120 UNC13DQ70J99 1090 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 TTC30AQ86WT1 665 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 ULK4Q96C45 1275 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 PPP1R36Q96LQ0 422 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 ANTXR1Q9H6X2 564 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 SLAIN2Q9P270 581 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 MAGI2Q86UL8 1455 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 USP17L5A8MUK1 530 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 USPL1Q5W0Q7 1092 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 UBE4BO95155 1302 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 MIF4GDA9UHW6 222 aaKnown RBP9.69□□□□□ -0.86
CSMD1-218ENST00000635120 CCDC92Q53HC0 331 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-218ENST00000635120 NBPF10Q6P3W6 841 aaKnown RBP9.69□□□□□ -0.86
CSMD1-218ENST00000635120 PDXDC1Q6P996 788 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 ATXN7L3BQ96GX2 97 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 SNF8Q96H20 258 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 PAWRQ96IZ0 340 aaKnown RBP9.69□□□□□ -0.86
CSMD1-218ENST00000635120 ASAP1Q9ULH1 1129 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 ABCB11O95342 1321 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 TCP11X1B4DZS4 312 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 CHUKO15111 745 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 NDUFAF2Q8N183 169 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 CASZ1Q86V15 1759 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 ROR1Q01973 937 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 COASYQ13057 564 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 TEDDM1Q5T9Z0 273 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 LRRC8EQ6NSJ5 796 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 DDIASQ8IXT1 998 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 OSBP2Q969R2 916 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 ICE1Q9Y2F5 2266 aa9.69□□□□□ -0.86
CSMD1-218ENST00000635120 RECQLP46063 649 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-218ENST00000635120 JAK3P52333 1124 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 PMS2P54278 862 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 FASTKD1Q53R41 847 aaKnown RBP9.68□□□□□ -0.86
CSMD1-218ENST00000635120 CAPRIN2Q6IMN6 1127 aaKnown RBP9.68□□□□□ -0.86
CSMD1-218ENST00000635120 AFG1LQ8WV93 481 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 OLFM3Q96PB7 478 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 ETNK1Q9HBU6 452 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 DONSONQ9NYP3 566 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 LIFRP42702 1097 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 CDK8P49336 464 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 ZNF211Q13398 564 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-218ENST00000635120 FLAD1Q8NFF5 587 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.68□□□□□ -0.861e-7■□□□□ 9.3
CSMD1-218ENST00000635120 ANKARQ7Z5J8 1434 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 AFDNP55196 1824 aaKnown RBP9.68□□□□□ -0.86
CSMD1-218ENST00000635120 GUCY1A3Q02108 690 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 CATSPER4Q7RTX7 472 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 TEX2Q8IWB9 1127 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 AGR3Q8TD06 166 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 ASNSD1Q9NWL6 643 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 PI4KBQ9UBF8 816 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 SERPINB10P48595 397 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 GPC5P78333 572 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 DSTYKQ6XUX3 929 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 ZBED8Q8IZ13 594 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 ARL8AQ96BM9 186 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 DHX36Q9H2U1 1008 aaKnown RBP9.68□□□□□ -0.86
CSMD1-218ENST00000635120 ZNF394Q53GI3 561 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 ZFYVE19Q96K21 471 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 BPIFA3Q9BQP9 254 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 ELF1P32519 619 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 PRCPP42785 496 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 AARSP49588 968 aaKnown RBP eCLIP9.68□□□□□ -0.86
CSMD1-218ENST00000635120 POLIQ9UNA4 740 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 PMS1P54277 932 aaKnown RBP9.68□□□□□ -0.86
CSMD1-218ENST00000635120 SFR1Q86XK3 245 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 NEDD4P46934 1319 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 CFAP69A5D8W1 941 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 ALDH18A1P54886 795 aaKnown RBP9.68□□□□□ -0.86
CSMD1-218ENST00000635120 CHCHD3Q9NX63 227 aaKnown RBP9.68□□□□□ -0.86
CSMD1-218ENST00000635120 LCMT1Q9UIC8 334 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 MYCP01106 439 aaPredicted RBP9.68□□□□□ -0.86
CSMD1-218ENST00000635120 PTK2BQ14289 1009 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 ATP6V1G3Q96LB4 118 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 MAGEB5Q9BZ81 275 aa9.68□□□□□ -0.86
CSMD1-218ENST00000635120 GRID2IPA4D2P6 1211 aa9.67□□□□□ -0.86
CSMD1-218ENST00000635120 PJA2O43164 708 aa9.67□□□□□ -0.86
CSMD1-218ENST00000635120 KDM1AO60341 852 aa9.67□□□□□ -0.86
CSMD1-218ENST00000635120 MRPL28Q13084 256 aaKnown RBP9.67□□□□□ -0.86
CSMD1-218ENST00000635120 ZNF711Q9Y462 761 aa9.67□□□□□ -0.86
CSMD1-218ENST00000635120 ARHGAP10A1A4S6 786 aa9.67□□□□□ -0.86
CSMD1-218ENST00000635120 CCDC159P0C7I6 412 aa9.67□□□□□ -0.86
CSMD1-218ENST00000635120 FGFR4P22455 802 aa9.67□□□□□ -0.86
CSMD1-218ENST00000635120 SSTR3P32745 418 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms