RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 EXOC3L4Q17RC7 722 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 PPM1LQ5SGD2 360 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 CCDC122Q5T0U0 273 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 CCHCR1Q8TD31 782 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 ANKS1AQ92625 1134 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 BCL2L12Q9HB09 334 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 PXMP2Q9NR77 195 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 MRPL17Q9NRX2 175 aaKnown RBP6.78□□□□□ -1.32
SMAD4-212ENST00000591126 WDR35Q9P2L0 1181 aa6.78□□□□□ -1.32
SMAD4-212ENST00000591126 NWD2Q9ULI1 1742 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 A0A0G2JLL6 359 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 BTBD18B2RXH4 712 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 NEMP1O14524 444 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 SORBS3O60504 671 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 RHOBTB3O94955 611 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 S100BP04271 92 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 COL6A1P12109 1028 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 ABCB4P21439 1286 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 NAMPTP43490 491 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 KPNA2P52292 529 aaKnown RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 CYP26C1Q6V0L0 522 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 PRRT2Q7Z6L0 340 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 DSG4Q86SJ6 1040 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 NELFCDQ8IXH7 590 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 MB21D2Q8IYB1 491 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 SCFD1Q8WVM8 642 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 IVLP07476 585 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 CYP2C8P10632 490 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 KLRC2P26717 231 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 INAVAQ3KP66 663 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 TMTC1Q8IUR5 882 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 LEMD2Q8NC56 503 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 PPM1EQ8WY54 764 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 TJP2Q9UDY2 1190 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 NFASCO94856 1347 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 LRP6O75581 1613 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 ABHD14A-ACY1A0A1B0GW23 586 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 CTSHP09668 335 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 HSPA1AP0DMV8 641 aaKnown RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 HSPA1BP0DMV9 641 aaKnown RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 ZFXP17010 805 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 DDIT3P35638 169 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 HERC6Q8IVU3 1022 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 PPM1KQ8N3J5 372 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 E2F7Q96AV8 911 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 CCDC127Q96BQ5 260 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 EIF2AK1Q9BQI3 630 aaKnown RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 BHMT2Q9H2M3 363 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 HIPK3Q9H422 1215 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 OLA1Q9NTK5 396 aaKnown RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 TRPM5Q9NZQ8 1165 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 AGO2Q9UKV8 859 aaKnown RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 DOLKQ9UPQ8 538 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 NR2E1Q9Y466 385 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 BTBD19C9JJ37 291 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 PSMD3O43242 534 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 INHAP05111 366 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 SLFN14P0C7P3 912 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 NR2F2P24468 414 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 PRKCEQ02156 737 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 IFRD2Q12894 506 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-212ENST00000591126 KRT33BQ14525 404 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 ERCC6LQ2NKX8 1250 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 ATAT1Q5SQI0 421 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 TMCO4Q5TGY1 634 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 LRRC43Q8N309 656 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 RNF214Q8ND24 703 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 DYDC2Q96IM9 177 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 C1QTNF7Q9BXJ2 289 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 GPR88Q9GZN0 384 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 NFU1Q9UMS0 254 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 NCKAP1Q9Y2A7 1128 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 LMO7Q8WWI1 1683 aa6.77□□□□□ -1.33
SMAD4-212ENST00000591126 CYP2D7A0A087X1C5 515 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 THP07101 528 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 CTNNB1P35222 781 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 ACTR2P61160 394 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 PTH1RQ03431 593 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 DNM1Q05193 864 aaKnown RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 SGSM1Q2NKQ1 1148 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 NAALADL2Q58DX5 795 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 SH3D19Q5HYK7 790 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 ATF7IP2Q5U623 682 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 PLPPR4Q7Z2D5 763 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 TMC6Q7Z403 805 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 C7orf61Q8IZ16 206 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 PDZD8Q8NEN9 1154 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 KIF18AQ8NI77 898 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 N4BP2L2Q92802 583 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 SRRTQ9BXP5 876 aaKnown RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 LY9Q9HBG7 655 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 OLFML3Q9NRN5 406 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 TYW1Q9NV66 732 aaKnown RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 PCDHB6Q9Y5E3 794 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 AKR1B15C9JRZ8 316 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 RTN3O95197 1032 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 POMCP01189 267 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 MYBL1P10243 752 aa6.76□□□□□ -1.33
SMAD4-212ENST00000591126 MAPTP10636 758 aaKnown RBP6.76□□□□□ -1.33
SMAD4-212ENST00000591126 PLS3P13797 630 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms