RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 FGD4Q96M96 766 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 OSMRQ99650 979 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 FSD1Q9BTV5 496 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 CHRDQ9H2X0 955 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 PDGFCQ9NRA1 345 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 TOMM22Q9NS69 142 aa6.52□□□□□ -1.37
DNMT1-220ENST00000589351 ASTN1O14525 1302 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 ZNF536O15090 1300 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 GRIN2DO15399 1336 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 UMODL1Q5DID0 1318 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 TTC41PQ6P2S7 1318 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 GREB1LQ9C091 1923 aaPredicted RBP6.51□□□□□ -1.37
DNMT1-220ENST00000589351 M0R2C6 588 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 BAIAP3O94812 1187 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 RECKO95980 971 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 CA3P07451 260 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 CYP2C9P11712 490 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 ADH5P11766 374 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 RAB6AP20340 208 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 CALML3P27482 149 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 ALDH5A1P51649 535 aaPredicted RBP6.51□□□□□ -1.37
DNMT1-220ENST00000589351 PURAQ00577 322 aaKnown RBP6.51□□□□□ -1.37
DNMT1-220ENST00000589351 BAATQ14032 418 aaPredicted RBP6.51□□□□□ -1.37
DNMT1-220ENST00000589351 MAP7Q14244 749 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 TTLL4Q14679 1199 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 PPP2R5BQ15173 497 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 MUM1L1Q5H9M0 696 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 NFRKBQ6P4R8 1299 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 XKR5Q6UX68 686 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 RNF207Q6ZRF8 634 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 NPAS4Q8IUM7 802 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 FBXO16Q8IX29 292 aaPredicted RBP6.51□□□□□ -1.37
DNMT1-220ENST00000589351 DNERQ8NFT8 737 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 MORC4Q8TE76 937 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 SCFD2Q8WU76 684 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 CHMP4CQ96CF2 233 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 CRBNQ96SW2 442 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 ZKSCAN3Q9BRR0 538 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 MAF1Q9H063 256 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 WNT8AQ9H1J5 351 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 SEMA6CQ9H3T2 930 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 DCTPP1Q9H773 170 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 EPB41L4AQ9HCS5 686 aaPredicted RBP6.51□□□□□ -1.37
DNMT1-220ENST00000589351 LMCD1Q9NZU5 365 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 RCAN3Q9UKA8 241 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 ZMIZ1Q9ULJ6 1067 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 PLIN4Q96Q06 1357 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 MCM3APO60318 1980 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 MYO9BQ13459 2157 aa6.51□□□□□ -1.37
DNMT1-220ENST00000589351 EFCAB14O75071 495 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 IQCF3P0C7M6 154 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 TXNP10599 105 aaKnown RBP6.5□□□□□ -1.37
DNMT1-220ENST00000589351 TOP1P11387 765 aaKnown RBP6.5□□□□□ -1.37
DNMT1-220ENST00000589351 ESRRAP11474 423 aaPredicted RBP6.5□□□□□ -1.37
DNMT1-220ENST00000589351 MYOGP15173 224 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 GSTM4Q03013 218 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 SF3A1Q15459 793 aaKnown RBP6.5□□□□□ -1.37
DNMT1-220ENST00000589351 TMEM31Q5JXX7 168 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 SYDE2Q5VT97 1194 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 BTNL9Q6UXG8 535 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 HERC6Q8IVU3 1022 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 CAGE1Q8TC20 777 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 AFAP1L1Q8TED9 768 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 TMEM40Q8WWA1 233 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 ARNTL2Q8WYA1 636 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 TTC14Q96N46 770 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 RANBP17Q9H2T7 1088 aaKnown RBP6.5□□□□□ -1.37
DNMT1-220ENST00000589351 TRMT13Q9NUP7 481 aaKnown RBP6.5□□□□□ -1.37
DNMT1-220ENST00000589351 MTCH2Q9Y6C9 303 aa6.5□□□□□ -1.37
DNMT1-220ENST00000589351 VCANP13611 3396 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 A6NHS1 94 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 RFXAPO00287 272 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 ORC4O43929 436 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 RNASE1P07998 156 aaKnown RBP6.49□□□□□ -1.37
DNMT1-220ENST00000589351 PCP11498 1178 aaKnown RBP6.49□□□□□ -1.37
DNMT1-220ENST00000589351 CASTP20810 708 aaKnown RBP6.49□□□□□ -1.37
DNMT1-220ENST00000589351 SLC16A2P36021 539 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 KCNQ1P51787 676 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 CHMP4BP1P59074 171 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 SNAP25P60880 206 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 TFF2Q03403 129 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 TAP1Q03518 808 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 PTGISQ16647 500 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 CCDC178Q5BJE1 867 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 RRP12Q5JTH9 1297 aaKnown RBP6.49□□□□□ -1.37
DNMT1-220ENST00000589351 EXOC8Q8IYI6 725 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 ASAP3Q8TDY4 903 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 SEC62Q99442 399 aaKnown RBP6.49□□□□□ -1.37
DNMT1-220ENST00000589351 KATNAL1Q9BW62 490 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 NRSN2Q9GZP1 204 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 CERS4Q9HA82 394 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 RC3H2Q9HBD1 1191 aaKnown RBP6.49□□□□□ -1.37
DNMT1-220ENST00000589351 IL17RBQ9NRM6 502 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 HELLSQ9NRZ9 838 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 C1GALT1Q9NS00 363 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 TCP11L1Q9NUJ3 509 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 MBNL3Q9NUK0 354 aaKnown RBP6.49□□□□□ -1.37
DNMT1-220ENST00000589351 CTNNA3Q9UI47 895 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 ANAPC4Q9UJX5 808 aa6.49□□□□□ -1.37
DNMT1-220ENST00000589351 TCF20Q9UGU0 1960 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms