RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PSPC1Q8WXF1 523 aaKnown RBP12.49□□□□□ -0.41
SMAD4-205ENST00000588745 TRIB2Q92519 343 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 LENG1Q96BZ8 264 aaPredicted RBP12.49□□□□□ -0.41
SMAD4-205ENST00000588745 IQCDQ96DY2 449 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 BORCS6Q96GS4 357 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 CBWD1Q9BRT8 395 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 TUT1Q9H6E5 874 aaKnown RBP12.49□□□□□ -0.41
SMAD4-205ENST00000588745 HSPBP1Q9NZL4 362 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 FRMD4BQ9Y2L6 1034 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 Q9Y3F1 56 aa12.49□□□□□ -0.41
SMAD4-205ENST00000588745 HNRNPDLO14979 420 aaKnown RBP12.48□□□□□ -0.41
SMAD4-205ENST00000588745 F2P00734 622 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 SKILP12757 684 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 VEGFBP49765 207 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 CPT1AP50416 773 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 FXR1P51114 621 aaKnown RBP eCLIP12.48□□□□□ -0.41
SMAD4-205ENST00000588745 ADKP55263 362 aaKnown RBP12.48□□□□□ -0.41
SMAD4-205ENST00000588745 IGBP1P78318 339 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 STRN3Q13033 797 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 MXD4Q14582 209 aaPredicted RBP12.48□□□□□ -0.41
SMAD4-205ENST00000588745 DCAF17Q5H9S7 520 aaPredicted RBP12.48□□□□□ -0.41
SMAD4-205ENST00000588745 FIGNQ5HY92 759 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 CDCA2Q69YH5 1023 aaPredicted RBP12.48□□□□□ -0.41
SMAD4-205ENST00000588745 SLC39A4Q6P5W5 647 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 XXYLT1Q8NBI6 393 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 RETREG2Q8NC44 543 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 TRPV1Q8NER1 839 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 KIAA1524Q8TCG1 905 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 PRPF31Q8WWY3 499 aaKnown RBP12.48□□□□□ -0.41
SMAD4-205ENST00000588745 SLC35C1Q96A29 364 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 CCDC51Q96ER9 411 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 PCMTD1Q96MG8 357 aaPredicted RBP12.48□□□□□ -0.41
SMAD4-205ENST00000588745 NUP58Q9BVL2 599 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 TTYH3Q9C0H2 523 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 TMEM134Q9H6X4 195 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 SUGCTQ9HAC7 445 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 RNF186Q9NXI6 227 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 SIK3Q9Y2K2 1263 aa12.48□□□□□ -0.41
SMAD4-205ENST00000588745 ANKRD63C9JTQ0 380 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 MAPK13O15264 365 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 MAGEB2O15479 319 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 ADCY3O60266 1144 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 TRPA1O75762 1119 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 PIGRP01833 764 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 AFPP02771 609 aaKnown RBP12.47□□□□□ -0.41
SMAD4-205ENST00000588745 CNGA1P29973 690 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 KLK7P49862 253 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 CLCN3P51790 818 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 CAP1Q01518 475 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 LAMTOR4Q0VGL1 99 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 KCNH2Q12809 1159 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 PPFIA1Q13136 1202 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 BRDTQ58F21 947 aaPredicted RBP12.47□□□□□ -0.41
SMAD4-205ENST00000588745 EFCAB12Q6NXP0 572 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 ZBTB8OSQ8IWT0 167 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 LINC01465Q8N7H1 131 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 CPLX3Q8WVH0 158 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 BICD1Q96G01 975 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 PANX2Q96RD6 677 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 AP5M1Q9H0R1 490 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 TMX1Q9H3N1 280 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 PCIF1Q9H4Z3 704 aa12.47□□□□□ -0.41
SMAD4-205ENST00000588745 SUCLA2Q9P2R7 463 aaPredicted RBP12.47□□□□□ -0.41
SMAD4-205ENST00000588745 TTC26A0AVF1 554 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 ZNF500O60304 480 aaPredicted RBP12.46□□□□□ -0.41
SMAD4-205ENST00000588745 DUSP11O75319 330 aaKnown RBP12.46□□□□□ -0.41
SMAD4-205ENST00000588745 TRIM21P19474 475 aaKnown RBP12.46□□□□□ -0.41
SMAD4-205ENST00000588745 GARTP22102 1010 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 KLRC1P26715 233 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 ADSSP30520 456 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 LIG4P49917 911 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 EFNA5P52803 228 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 BFSP1Q12934 665 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 TFDP1Q14186 410 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 GRIK4Q16099 956 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 TCERG1LQ5VWI1 586 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 MTHFD1LQ6UB35 978 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 INTS8Q75QN2 995 aaKnown RBP12.46□□□□□ -0.41
SMAD4-205ENST00000588745 TMEM139Q8IV31 216 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 CCDC155Q8N6L0 562 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 METTL13Q8N6R0 699 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 CCDC113Q9H0I3 377 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 C2orf40Q9H1Z8 148 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 ABHD10Q9NUJ1 306 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 CAPN11Q9UMQ6 739 aa12.46□□□□□ -0.41
SMAD4-205ENST00000588745 A0A1W2PQJ5 194 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 K7ERI5 159 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 RNF225M0QZC1 329 aaPredicted RBP12.45□□□□□ -0.42
SMAD4-205ENST00000588745 ASAP2O43150 1006 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 STX10O60499 249 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 EDN1P05305 212 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 KRT13P13646 458 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 FECHP22830 423 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 KRT9P35527 623 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 KCNJ6P48051 423 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 KCNMA1Q12791 1236 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 RHPN2Q8IUC4 686 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 RNF149Q8NC42 400 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 NEK11Q8NG66 645 aa12.45□□□□□ -0.42
SMAD4-205ENST00000588745 CD99L2Q8TCZ2 262 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms