RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 AGTP01019 485 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 FCER1AP12319 257 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 ATP2A2P16615 1042 aaKnown RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 POLD1P28340 1107 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 MSH2P43246 934 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 MAP3K10Q02779 954 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 LRRC63Q05C16 580 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 KLRC3Q07444 240 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 ODF2Q5BJF6 829 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 DALRD3Q5D0E6 543 aaKnown RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 BTNL9Q6UXG8 535 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 DTHD1Q6ZMT9 781 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 SLF2Q8IX21 1173 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 KLHL7Q8IXQ5 586 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 ZC3H3Q8IXZ2 948 aaKnown RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 ENDOVQ8N8Q3 282 aaKnown RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 TGFBRAP1Q8WUH2 860 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 UBLCP1Q8WVY7 318 aaPredicted RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 ESR2Q92731 530 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 DDX12PQ92771 950 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 NAF1Q96HR8 494 aaKnown RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 ECT2Q9H8V3 914 aa5.9□□□□□ -1.47
LINC01541-202ENST00000568095 LUC7LQ9NQ29 371 aaKnown RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 ZNF277Q9NRM2 450 aaPredicted RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 FAM207AQ9NSI2 230 aaPredicted RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 CPSF2Q9P2I0 782 aaKnown RBP5.9□□□□□ -1.47
LINC01541-202ENST00000568095 SSC5DA1L4H1 1573 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 A0A0A6YYK5 440 aaPredicted RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 PVALEFA0A1B0GWK0 134 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 DPPA5A6NC42 116 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 PP2D1A8MPX8 630 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 IGF2BP3O00425 579 aaKnown RBP eCLIP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 DAPK3O43293 454 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 ATP2C2O75185 946 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 FGFR1OPO95684 399 aaKnown RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 CNGA1P29973 690 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 NPEPPSP55786 919 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 DHX9Q08211 1270 aaKnown RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 NFIAQ12857 509 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 HLTFQ14527 1009 aaKnown RBP eCLIP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 RPS6KA1Q15418 735 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 CNGA2Q16280 664 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 SLC35G1Q2M3R5 365 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 PARP6Q2NL67 630 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 KRT71Q3SY84 523 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 ZCWPW2Q504Y3 356 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 SFMBT2Q5VUG0 894 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 DUPD1Q68J44 220 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 MFSD5Q6N075 450 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 CROCCP2Q86T23 111 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 PNMA8AQ86V59 439 aaPredicted RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 GUF1Q8N442 669 aaKnown RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 TMEM60Q9H2L4 133 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 PABPC3Q9H361 631 aaKnown RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 ARHGEF10LQ9HCE6 1279 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 PAPOLBQ9NRJ5 636 aaKnown RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 SUCLA2Q9P2R7 463 aaPredicted RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 PACSIN2Q9UNF0 486 aaPredicted RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 NOC2LQ9Y3T9 749 aaKnown RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 USP15Q9Y4E8 981 aaPredicted RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 A0A087X0T9 212 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 SPDYE3A6NKU9 549 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 SHBGP04278 402 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 FAM228BP0C875 321 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 ATP6V1C1P21283 382 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 ANXA13P27216 316 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 CALML3P27482 149 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 SHMT1P34896 483 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 PDE6CP51160 858 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 MRPS35P82673 323 aaKnown RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 ACVR2BQ13705 512 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 FAM83BQ5T0W9 1011 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 DPH6Q7L8W6 267 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 APBB1IPQ7Z5R6 666 aaPredicted RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 CATIPQ7Z7H3 387 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 ZFPM1Q8IX07 1006 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 BLIDQ8IZY5 108 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 METTL13Q8N6R0 699 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 ANKLE1Q8NAG6 615 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 AGBL3Q8NEM8 1001 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 ATL2Q8NHH9 583 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 PRCCQ92733 491 aaPredicted RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 TEKT1Q969V4 418 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 UTP4Q969X6 686 aaKnown RBP5.89□□□□□ -1.47
LINC01541-202ENST00000568095 FAM136AQ96C01 138 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 HES6Q96HZ4 224 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 OSBPL1AQ9BXW6 950 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 RXFP1Q9HBX9 757 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 SAMD15Q9P1V8 674 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 WDR35Q9P2L0 1181 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 ZNRF3Q9ULT6 936 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 PCDHA4Q9UN74 947 aa5.89□□□□□ -1.47
LINC01541-202ENST00000568095 A8MUI8 341 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 KCNK3O14649 394 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 PLCG1P19174 1290 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 PEX19P40855 299 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 CTCFP49711 727 aaPredicted RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 SNX1Q13596 522 aa5.88□□□□□ -1.47
LINC01541-202ENST00000568095 FAM133BQ5BKY9 247 aaKnown RBP5.88□□□□□ -1.47
LINC01541-202ENST00000568095 FKBP1CQ5VVH2 108 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms