RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 DNAJC25Q9H1X3 360 aa7.46□□□□□ -1.21
LINC00517-202ENST00000554257 SCN1AP35498 2009 aa7.46□□□□□ -1.21
LINC00517-202ENST00000554257 TTC3P53804 2025 aa7.46□□□□□ -1.21
LINC00517-202ENST00000554257 TISP43B9A030 160 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 ANKRD63C9JTQ0 380 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 IKBKBO14920 756 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 SCP2P22307 547 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 ERCC5P28715 1186 aaPredicted RBP7.46□□□□□ -1.22
LINC00517-202ENST00000554257 POLGP54098 1239 aaPredicted RBP7.46□□□□□ -1.22
LINC00517-202ENST00000554257 WNT7BP56706 349 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 DHX8Q14562 1220 aaKnown RBP7.46□□□□□ -1.22
LINC00517-202ENST00000554257 LRRC26Q2I0M4 334 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 C1orf220Q5T0J3 134 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 ISM2Q6H9L7 571 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 CRELD2Q6UXH1 353 aaPredicted RBP7.46□□□□□ -1.22
LINC00517-202ENST00000554257 SLC9A9Q8IVB4 645 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 CCDC65Q8IXS2 484 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 BMP2KQ9NSY1 1161 aaPredicted RBP7.46□□□□□ -1.22
LINC00517-202ENST00000554257 RMND1Q9NWS8 449 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 TCEAL9Q9UHQ7 104 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 TBX20Q9UMR3 447 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 TRPC6Q9Y210 931 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 CNTNAP2Q9UHC6 1331 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 ZEB2O60315 1214 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 SMC2O95347 1197 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 VTNP04004 478 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 TBC1D8BQ0IIM8 1120 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 DSC3Q14574 896 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 FAM102BQ5T8I3 360 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 ZNF410Q86VK4 478 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 EXOC8Q8IYI6 725 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 NME8Q8N427 588 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 ARRDC4Q8NCT1 418 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 ENOX1Q8TC92 643 aaKnown RBP7.46□□□□□ -1.22
LINC00517-202ENST00000554257 PLEKHO2Q8TD55 490 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 TCP11Q8WWU5 503 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 DHTKD1Q96HY7 919 aaPredicted RBP7.46□□□□□ -1.22
LINC00517-202ENST00000554257 WNT8AQ9H1J5 351 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 INTS13Q9NVM9 706 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 SUCLA2Q9P2R7 463 aaPredicted RBP7.46□□□□□ -1.22
LINC00517-202ENST00000554257 TBX21Q9UL17 535 aa7.46□□□□□ -1.22
LINC00517-202ENST00000554257 TRANK1O15050 2925 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 SLC16A4O15374 487 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 CAND2O75155 1236 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 ITGB8P26012 769 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 PEX3P56589 373 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 MXD4Q14582 209 aaPredicted RBP7.45□□□□□ -1.22
LINC00517-202ENST00000554257 UBXN11Q5T124 520 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 TSHZ1Q6ZSZ6 1077 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 TOX2Q96NM4 488 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 TRPV6Q9H1D0 765 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 TMX1Q9H3N1 280 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 TSPAN1O60635 241 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 CCNE1P24864 410 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 CLDN10P78369 228 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 KNOP1Q1ED39 458 aaKnown RBP7.45□□□□□ -1.22
LINC00517-202ENST00000554257 HAUS6Q7Z4H7 955 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 LINC01599Q8WXQ3 324 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 SLC7A3Q8WY07 619 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 ACO2Q99798 780 aaKnown RBP7.45□□□□□ -1.22
LINC00517-202ENST00000554257 EXOC1Q9NV70 894 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 TBC1D7Q9P0N9 293 aa7.45□□□□□ -1.22
LINC00517-202ENST00000554257 ASAP2O43150 1006 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 PRPF6O94906 941 aaKnown RBP7.44□□□□□ -1.22
LINC00517-202ENST00000554257 CCDC192P0DO97 292 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 CKBP12277 381 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 ALCAMQ13740 583 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 EDRF1Q3B7T1 1238 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 ODR4Q5SWX8 454 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 MAEAQ7L5Y9 396 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 FAM228AQ86W67 206 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 CXorf38Q8TB03 319 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 DNAJB3Q8WWF6 145 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 P2RX5Q93086 422 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 GTPBP4Q9BZE4 634 aaKnown RBP7.44□□□□□ -1.22
LINC00517-202ENST00000554257 ERVK-5Q9HDB9 667 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 HOOK1Q9UJC3 728 aaKnown RBP7.44□□□□□ -1.22
LINC00517-202ENST00000554257 CTNND2Q9UQB3 1225 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 CHD7Q9P2D1 2997 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 A0A087WZ62 844 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.44□□□□□ -1.22
LINC00517-202ENST00000554257 PDXKO00764 312 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 B4GALT5O43286 388 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 CXCL10P02778 98 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 CYP2C9P11712 490 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 DARSP14868 501 aaKnown RBP7.44□□□□□ -1.22
LINC00517-202ENST00000554257 MRPS6P82932 125 aaKnown RBP7.44□□□□□ -1.22
LINC00517-202ENST00000554257 PTGISQ16647 500 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 HERC4Q5GLZ8 1057 aaPredicted RBP7.44□□□□□ -1.22
LINC00517-202ENST00000554257 MIIPQ5JXC2 388 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 COL13A1Q5TAT6 717 aaPredicted RBP7.44□□□□□ -1.22
LINC00517-202ENST00000554257 MYCT1Q8N699 235 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 NELFBQ8WX92 580 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 FDXACB1Q9BRP7 624 aaPredicted RBP7.44□□□□□ -1.22
LINC00517-202ENST00000554257 NOC4LQ9BVI4 516 aaKnown RBP7.44□□□□□ -1.22
LINC00517-202ENST00000554257 TSPY26PQ9H489 355 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 PDZD7Q9H5P4 517 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 AGPAT3Q9NRZ7 376 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 ANO10Q9NW15 660 aa7.44□□□□□ -1.22
LINC00517-202ENST00000554257 UMODL1Q5DID0 1318 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms