RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 HAUS6Q7Z4H7 955 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 POMGNT1Q8WZA1 660 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 RMDN3Q96TC7 470 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 VCPKMTQ9H867 229 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 LRRC4CQ9HCJ2 640 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 MAGOHP61326 146 aaKnown RBP14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 RASA3Q14644 834 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 UGCGQ16739 394 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 FAM182AQ5T1J6 154 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 SAMD7Q7Z3H4 446 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 SLC47A2Q86VL8 602 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 CCDC50Q8IVM0 306 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 HEMGNQ9BXL5 484 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 ERVK-5Q9HDB9 667 aa14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 COL5A3P25940 1745 aaPredicted RBP14.78□□□□□ -0.04
PRPF40B-209ENST00000548825 ADAMTSL1Q8N6G6 1762 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 GOLGA6L10A0A0M3HER8 536 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 BCRP11274 1271 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 RPS6P62753 249 aaKnown RBP14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 MTM1Q13496 603 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 MTMR2Q13614 643 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 OTUD6BQ8N6M0 293 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 SYN2Q92777 582 aaPredicted RBP14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 TELO2Q9Y4R8 837 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 ASTN2O75129 1339 aaPredicted RBP14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 HNRNPDLO14979 420 aaKnown RBP14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 TBX3O15119 743 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 GMCL1P1Q8NEA9 526 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 ZNF653Q96CK0 615 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 CEP170P1Q96L14 293 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 POLR3CQ9BUI4 534 aaPredicted RBP14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 ALG6Q9Y672 507 aa14.77□□□□□ -0.04
PRPF40B-209ENST00000548825 NRAPQ86VF7 1730 aa14.77□□□□□ -0.05
PRPF40B-209ENST00000548825 FGFR4P22455 802 aa14.77□□□□□ -0.05
PRPF40B-209ENST00000548825 DR1Q01658 176 aa14.77□□□□□ -0.05
PRPF40B-209ENST00000548825 TTC31Q49AM3 519 aaPredicted RBP14.77□□□□□ -0.05
PRPF40B-209ENST00000548825 HP1BP3Q5SSJ5 553 aaPredicted RBP14.77□□□□□ -0.05
PRPF40B-209ENST00000548825 ALG3Q92685 438 aa14.77□□□□□ -0.05
PRPF40B-209ENST00000548825 TMEM51Q9NW97 253 aa14.77□□□□□ -0.05
PRPF40B-209ENST00000548825 HSPBP1Q9NZL4 362 aa14.77□□□□□ -0.05
PRPF40B-209ENST00000548825 TMX2Q9Y320 296 aa14.77□□□□□ -0.05
PRPF40B-209ENST00000548825 CAPN7Q9Y6W3 813 aa14.77□□□□□ -0.05
PRPF40B-209ENST00000548825 EIF3HO15372 352 aaKnown RBP eCLIP14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 LMNB1P20700 586 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 YWHABP31946 246 aaKnown RBP14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 PPP1R7Q15435 360 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 ALS2CLQ60I27 953 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 NT5DC3Q86UY8 548 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 C1orf54Q8WWF1 131 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 CCDC114Q96M63 670 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 STK33Q9BYT3 514 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 KLHL11Q9NVR0 708 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 ANKFY1Q9P2R3 1169 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 ERLIN2O94905 339 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 MMEP08473 750 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 TNNI1P19237 187 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 HDLBPQ00341 1268 aaKnown RBP14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 ZNF394Q53GI3 561 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 WDR78Q5VTH9 848 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 CHADLQ6NUI6 762 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 EPM2AIP1Q7L775 607 aaPredicted RBP14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 FAM213AQ9BRX8 229 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 GGT7Q9UJ14 662 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 COG5Q9UP83 839 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 DAAM1Q9Y4D1 1078 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 FRMD3A2A2Y4 597 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 DENND3A2RUS2 1198 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 KLRG2A4D1S0 409 aaPredicted RBP14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 FOXO6A8MYZ6 492 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 CDR1P51861 262 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 MTERF2Q49AM1 385 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 RSBN1LQ6PCB5 846 aaPredicted RBP14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 NIM1KQ8IY84 436 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 SYCE1Q8N0S2 351 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 ZKSCAN4Q969J2 545 aaPredicted RBP14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 WNK4Q96J92 1243 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 FMO2Q99518 471 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 MXRA8Q9BRK3 442 aa14.76□□□□□ -0.05
PRPF40B-209ENST00000548825 TCRBV7S2A1N4TA0A589 114 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 LSP1P33241 339 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 ITGB3BPQ13352 177 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 CPLX4Q7Z7G2 160 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 DAW1Q8N136 415 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 TTLL6Q8N841 843 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 RFFLQ8WZ73 363 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 PBKQ96KB5 322 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 AGPAT1Q99943 283 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 GDF3Q9NR23 364 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 SEPT9Q9UHD8 586 aaPredicted RBP14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 ZMYM2Q9UBW7 1377 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 ENTPD3O75355 529 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 ACSL3O95573 720 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 COMTP21964 271 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 DEFB132Q7Z7B7 95 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 XXYLT1Q8NBI6 393 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 ATG4AQ8WYN0 398 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 ATP6V1G3Q96LB4 118 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 TCHPQ9BT92 498 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 TUFT1Q9NNX1 390 aa14.75□□□□□ -0.05
PRPF40B-209ENST00000548825 CEP350Q5VT06 3117 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms