RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 NCKAP1LP55160 1127 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 KRT76Q01546 638 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 XKR9Q5GH70 373 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 PRAMEF18Q5VWM3 479 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 SCYL3Q8IZE3 742 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 XXYLT1Q8NBI6 393 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 REPS2Q8NFH8 660 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 PLEKHA4Q9H4M7 779 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 GDF3Q9NR23 364 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 PPP1R1BQ9UD71 204 aaPredicted RBP20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 STXBP5LQ9Y2K9 1186 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 SOCS7O14512 581 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 FDX1P10109 184 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 SFNP31947 248 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 GCLMP48507 274 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 LMAN1P49257 510 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 EPHB4P54760 987 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 FAM102BQ5T8I3 360 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 PBKQ96KB5 322 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 TIPINQ9BVW5 301 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 PNMA2Q9UL42 364 aa20.12■□□□□ 0.81
PRPF40B-208ENST00000548436 HEXIM1O94992 359 aaKnown RBP20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 PTPRAP18433 802 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 KIF22Q14807 665 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 ANO5Q75V66 913 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 VSIG10LQ86VR7 867 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 PALB2Q86YC2 1186 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 ARHGEF19Q8IW93 802 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 METTL13Q8N6R0 699 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 ZNF280CQ8ND82 737 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 UBE2TQ9NPD8 197 aaPredicted RBP20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 OSGEPQ9NPF4 335 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 ANKEF1Q9NU02 776 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 TCEAL9Q9UHQ7 104 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 ZNF112Q9UJU3 913 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 DAAM1Q9Y4D1 1078 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 IGSF9BQ9UPX0 1349 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 NR3C2P08235 984 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 EPC2Q52LR7 807 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 DCAF15Q66K64 600 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 PEX26Q7Z412 305 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 IFT20Q8IY31 132 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 LMBR1Q8WVP7 490 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 WRNIP1Q96S55 665 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 FAM204AQ9H8W3 233 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 EPB41L5Q9HCM4 733 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 TAS2R14Q9NYV8 317 aa20.11■□□□□ 0.81
PRPF40B-208ENST00000548436 NCANO14594 1321 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 ESYT3A0FGR9 886 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 FAM170AA1A519 330 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 CEP104O60308 925 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 CCDC172P0C7W6 258 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 RFX1P22670 979 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 CCND2P30279 289 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 CARSP49589 748 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 HMGCS2P54868 508 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 GUCY2DQ02846 1103 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 SNRNP48Q6IEG0 339 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 EMBQ6PCB8 327 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 DAAM2Q86T65 1068 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 NT5DC3Q86UY8 548 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 SLC35G2Q8TBE7 412 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 ACTRT1Q8TDG2 376 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 KIFC3Q9BVG8 833 aa20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 MOV10L1Q9BXT6 1211 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-208ENST00000548436 GOLGA8IPA6NC78 632 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 GOLGA6BA6NDN3 693 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 GOLGA8JA6NMD2 632 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 ANKRD63C9JTQ0 380 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 FZD9O00144 591 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 ADRB2P07550 413 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 TMEM253P0C7T8 217 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 ABCB4P21439 1286 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 TNFAIP3P21580 790 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 ADSSP30520 456 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 TSEN2Q8NCE0 465 aaKnown RBP20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 SCFD2Q8WU76 684 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 CAVIN3Q969G5 261 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 SUCLA2Q9P2R7 463 aaPredicted RBP20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 TELO2Q9Y4R8 837 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 MAPK13O15264 365 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 P4HA2O15460 535 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 RAD51CO43502 376 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 ZNF746Q6NUN9 644 aaPredicted RBP20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 XRRA1Q6P2D8 792 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 NLRX1Q86UT6 975 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 FMNL3Q8IVF7 1028 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 KLHL7Q8IXQ5 586 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 SYCE1Q8N0S2 351 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 TMEM161BQ8NDZ6 487 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 SLC20A1Q8WUM9 679 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 RFFLQ8WZ73 363 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 GPRASP2Q96D09 838 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 AS3MTQ9HBK9 375 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 PICK1Q9NRD5 415 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 ZNF214Q9UL59 606 aaPredicted RBP20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 NFU1Q9UMS0 254 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 PCDHA10Q9Y5I2 948 aa20.09■□□□□ 0.81
PRPF40B-208ENST00000548436 CCDC169A6NNP5 214 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms