RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 INSL6Q9Y581 213 aa21.17■□□□□ 0.98
DDX55-211ENST00000544429 ADGRA3Q8IWK6 1321 aa21.17■□□□□ 0.98
DDX55-211ENST00000544429 A0A0U1RQF3 1178 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 DENND3A2RUS2 1198 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 LCHNA4D1U4 455 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 DGKIO75912 1065 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 MCM6Q14566 821 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 PPP2R5AQ15172 486 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 E2F4Q16254 413 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 FAM187BQ17R55 369 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 PPP4R3CPQ6ZMV5 832 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 CATSPER4Q7RTX7 472 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 KCNN1Q92952 543 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 DRC1Q96MC2 740 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 NTPCRQ9BSD7 190 aaKnown RBP21.16■□□□□ 0.98
DDX55-211ENST00000544429 NKX2-4Q9H2Z4 354 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 FZD8Q9H461 694 aa21.16■□□□□ 0.98
DDX55-211ENST00000544429 CIZ1Q9ULV3 898 aaPredicted RBP21.16■□□□□ 0.98
DDX55-211ENST00000544429 LRRIQ4A6NIV6 560 aa21.15■□□□□ 0.98
DDX55-211ENST00000544429 TSPAN1O60635 241 aa21.15■□□□□ 0.98
DDX55-211ENST00000544429 CA3P07451 260 aa21.15■□□□□ 0.98
DDX55-211ENST00000544429 ZSCAN20P17040 1043 aaPredicted RBP21.15■□□□□ 0.98
DDX55-211ENST00000544429 ANP32AP39687 249 aaKnown RBP21.15■□□□□ 0.98
DDX55-211ENST00000544429 RRAGBQ5VZM2 374 aa21.15■□□□□ 0.98
DDX55-211ENST00000544429 RESP18Q5W5W9 173 aa21.15■□□□□ 0.98
DDX55-211ENST00000544429 CCDC73Q6ZRK6 1079 aa21.15■□□□□ 0.98
DDX55-211ENST00000544429 ZNF598Q86UK7 904 aaKnown RBP21.15■□□□□ 0.98
DDX55-211ENST00000544429 C2orf40Q9H1Z8 148 aa21.15■□□□□ 0.98
DDX55-211ENST00000544429 SEMA6BQ9H3T3 888 aa21.15■□□□□ 0.98
DDX55-211ENST00000544429 DACT1Q9NYF0 836 aa21.15■□□□□ 0.98
DDX55-211ENST00000544429 ODF2LQ9ULJ1 636 aa21.15■□□□□ 0.98
DDX55-211ENST00000544429 MYO9BQ13459 2157 aa21.14■□□□□ 0.98
DDX55-211ENST00000544429 RALGAPA2Q2PPJ7 1873 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 UPP2O95045 317 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 SSBP05455 408 aaKnown RBP eCLIP21.14■□□□□ 0.97
DDX55-211ENST00000544429 ATF7P17544 494 aaPredicted RBP21.14■□□□□ 0.97
DDX55-211ENST00000544429 AXLP30530 894 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 NPTX2P47972 431 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 ME1P48163 572 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 ZNF131P52739 623 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 TAP1Q03518 808 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 FAM117BQ6P1L5 589 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 GPBP1Q86WP2 473 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 RASSF8Q8NHQ8 419 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 PRIMPOLQ96LW4 560 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 REEP2Q9BRK0 252 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 ZBED2Q9BTP6 218 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 SCAND2PQ9GZW5 306 aaPredicted RBP21.14■□□□□ 0.97
DDX55-211ENST00000544429 ZNF576Q9H609 170 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 TMEM161AQ9NX61 479 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 ARHGAP28Q9P2N2 729 aa21.14■□□□□ 0.97
DDX55-211ENST00000544429 PIN4Q9Y237 131 aaKnown RBP21.14■□□□□ 0.97
DDX55-211ENST00000544429 NLRC5Q86WI3 1866 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 NPHP3-ACAD11A0A0J9YXS1 232 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 INO80B-WBP1J3KQ70 363 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 ZNF623O75123 536 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 LINC00271P0C7V0 271 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 STAG3L1P0CL83 205 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 GIT2Q14161 759 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 UBXN11Q5T124 520 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 ZNF697Q5TEC3 545 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 ADALQ6DHV7 355 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 ECHDC2Q86YB7 292 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 SPIRE2Q8WWL2 714 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 IFT74Q96LB3 600 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 SPATA32Q96LK8 384 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 SLC28A3Q9HAS3 691 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 RNF19AQ9NV58 838 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 RNF216Q9NWF9 866 aaPredicted RBP21.13■□□□□ 0.97
DDX55-211ENST00000544429 TRANK1O15050 2925 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 KIAA1671Q9BY89 1806 aa21.13■□□□□ 0.97
DDX55-211ENST00000544429 LINC01553A4QN01 128 aa21.12■□□□□ 0.97
DDX55-211ENST00000544429 ERLIN2O94905 339 aa21.12■□□□□ 0.97
DDX55-211ENST00000544429 PLS3P13797 630 aa21.12■□□□□ 0.97
DDX55-211ENST00000544429 ARF4P18085 180 aaPredicted RBP21.12■□□□□ 0.97
DDX55-211ENST00000544429 EFNA5P52803 228 aa21.12■□□□□ 0.97
DDX55-211ENST00000544429 PEX3P56589 373 aa21.12■□□□□ 0.97
DDX55-211ENST00000544429 RAD51AP2Q09MP3 1159 aa21.12■□□□□ 0.97
DDX55-211ENST00000544429 Q7L0L9 218 aa21.12■□□□□ 0.97
DDX55-211ENST00000544429 CCDC51Q96ER9 411 aa21.12■□□□□ 0.97
DDX55-211ENST00000544429 KIFC3Q9BVG8 833 aa21.12■□□□□ 0.97
DDX55-211ENST00000544429 PRMT7Q9NVM4 692 aaPredicted RBP21.12■□□□□ 0.97
DDX55-211ENST00000544429 MTMR10Q9NXD2 777 aa21.12■□□□□ 0.97
DDX55-211ENST00000544429 CNTNAP2Q9UHC6 1331 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 FAM237AA0A1B0GTK4 181 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 A0A1B0GUA9 196 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 SFI1A8K8P3 1242 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 B4GALT5O43286 388 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 EOMESO95936 686 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 EDN1P05305 212 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 CMA1P23946 247 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 STAT6P42226 847 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 DMP1Q13316 513 aaPredicted RBP21.11■□□□□ 0.97
DDX55-211ENST00000544429 PPP2R2DQ66LE6 453 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 TAS1R3Q7RTX0 852 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 ZBTB8OSQ8IWT0 167 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 DEFB123Q8N688 67 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 DEPTORQ8TB45 409 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 DNAJC19Q96DA6 116 aa21.11■□□□□ 0.97
DDX55-211ENST00000544429 FIZ1Q96SL8 496 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms