RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZBTB42B2RXF5 422 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 ADCYAP1R1P41586 468 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 CYP2J2P51589 502 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 MCCD1P59942 119 aaPredicted RBP10.2□□□□□ -0.78
GNE-206ENST00000543356 ACVR2BQ13705 512 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 MEA1Q16626 185 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 DUSP28Q4G0W2 176 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 IQSEC1Q6DN90 963 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 CYP26C1Q6V0L0 522 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 TRIM50Q86XT4 487 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 ZNF397Q8NF99 534 aaPredicted RBP10.2□□□□□ -0.78
GNE-206ENST00000543356 NEK11Q8NG66 645 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 SOCS4Q8WXH5 440 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 KIFC3Q9BVG8 833 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 ZSWIM8A7E2V4 1837 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 IGKV6-21A0A0C4DH24 114 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 ZSCAN12O43309 604 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 EXOC3O60645 756 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 HOXD8P13378 290 aaPredicted RBP10.2□□□□□ -0.78
GNE-206ENST00000543356 GLRA2P23416 452 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 ASAP3Q8TDY4 903 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 TCP11Q8WWU5 503 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 TMEM143Q96AN5 459 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 PPP1R13BQ96KQ4 1090 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 JPH2Q9BR39 696 aaPredicted RBP10.2□□□□□ -0.78
GNE-206ENST00000543356 MMRN2Q9H8L6 949 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 ERAP1Q9NZ08 941 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 HSPBP1Q9NZL4 362 aa10.2□□□□□ -0.78
GNE-206ENST00000543356 SOWAHDA6NJG2 315 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 HBP1O60381 514 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 LGALS2P05162 132 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 HNRNPH3P31942 346 aaKnown RBP10.19□□□□□ -0.78
GNE-206ENST00000543356 CDK17Q00537 523 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 CRHR2Q13324 411 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 TSR1Q2NL82 804 aaKnown RBP10.19□□□□□ -0.78
GNE-206ENST00000543356 DCAF17Q5H9S7 520 aaPredicted RBP10.19□□□□□ -0.78
GNE-206ENST00000543356 IER5Q5VY09 327 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 OLFML2BQ68BL8 750 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 NYAP1Q6ZVC0 841 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 CCDC155Q8N6L0 562 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 XXYLT1Q8NBI6 393 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 LSM14BQ9BX40 385 aaKnown RBP10.19□□□□□ -0.78
GNE-206ENST00000543356 PLCB1Q9NQ66 1216 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 FAM207AQ9NSI2 230 aaPredicted RBP10.19□□□□□ -0.78
GNE-206ENST00000543356 AGPAT5Q9NUQ2 364 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 CEP72Q9P209 647 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 COL1A2P08123 1366 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 PHLPP2Q6ZVD8 1323 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.19□□□□□ -0.78
GNE-206ENST00000543356 GOLGA6L9A6NEM1 432 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 EPHB6O15197 1021 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 PIGRP01833 764 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 SMPD1P17405 629 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 MARK3P27448 753 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 RGS2P41220 211 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 BFSP1Q12934 665 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 BRDTQ58F21 947 aaPredicted RBP10.19□□□□□ -0.78
GNE-206ENST00000543356 ZNF484Q5JVG2 852 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 RAD9BQ6WBX8 426 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 INTS8Q75QN2 995 aaKnown RBP10.19□□□□□ -0.78
GNE-206ENST00000543356 TAS1R3Q7RTX0 852 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 CBWD1Q9BRT8 395 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 TMEM134Q9H6X4 195 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 PPP2R2CQ9Y2T4 447 aa10.19□□□□□ -0.78
GNE-206ENST00000543356 TISP43B9A030 160 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 CA12O43570 354 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 NOL4O94818 638 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 IGHA2P01877 340 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 KRT13P13646 458 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 GARTP22102 1010 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 ENPEPQ07075 957 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 GJC2Q5T442 439 aaPredicted RBP10.18□□□□□ -0.78
GNE-206ENST00000543356 SLC39A4Q6P5W5 647 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 WDR59Q6PJI9 974 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 TOGARAM2Q6ZUX3 1019 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 DEPTORQ8TB45 409 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 AFG1LQ8WV93 481 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 BAP1Q92560 729 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 APBA2Q99767 749 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 NUCKS1Q9H1E3 243 aaKnown RBP10.18□□□□□ -0.78
GNE-206ENST00000543356 GANQ9H2C0 597 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 ZNHIT6Q9NWK9 470 aaKnown RBP10.18□□□□□ -0.78
GNE-206ENST00000543356 TRMT1Q9NXH9 659 aaKnown RBP10.18□□□□□ -0.78
GNE-206ENST00000543356 TRPC6Q9Y210 931 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 SPDYE4A6NLX3 237 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 ANKRD63C9JTQ0 380 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 KIF2AO00139 706 aaPredicted RBP10.18□□□□□ -0.78
GNE-206ENST00000543356 PPFIA4O75335 1185 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 CNGA1P29973 690 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 ADSSP30520 456 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 STRN3Q13033 797 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 CAPSQ13938 189 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 MTF1Q14872 753 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 TCERG1LQ5VWI1 586 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 DPY19L2P1Q6NXN4 242 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 GBP6Q6ZN66 633 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 OR6J1Q8NGC5 347 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 PCIF1Q9H4Z3 704 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 FBXL5Q9UKA1 691 aa10.18□□□□□ -0.78
GNE-206ENST00000543356 PLAGL2Q9UPG8 496 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms