RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 CATSPER4Q7RTX7 472 aa19.33■□□□□ 0.68
PDCD2-207ENST00000539212 TMEM143Q96AN5 459 aa19.33■□□□□ 0.68
PDCD2-207ENST00000539212 MRPL9Q9BYD2 267 aaKnown RBP19.33■□□□□ 0.68
PDCD2-207ENST00000539212 MINDY3Q9H8M7 445 aa19.33■□□□□ 0.68
PDCD2-207ENST00000539212 IFT122Q9HBG6 1241 aa19.33■□□□□ 0.68
PDCD2-207ENST00000539212 CHST12Q9NRB3 414 aa19.33■□□□□ 0.68
PDCD2-207ENST00000539212 FAM105AQ9NUU6 356 aa19.33■□□□□ 0.68
PDCD2-207ENST00000539212 TBC1D13Q9NVG8 400 aa19.33■□□□□ 0.68
PDCD2-207ENST00000539212 COL4A3BPQ9Y5P4 624 aa19.33■□□□□ 0.68
PDCD2-207ENST00000539212 TDRD15B5MCY1 1934 aaKnown RBP19.33■□□□□ 0.68
PDCD2-207ENST00000539212 PLXNA3P51805 1871 aa19.33■□□□□ 0.68
PDCD2-207ENST00000539212 FSD2A1L4K1 749 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 PFKFB2O60825 505 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 LARGE1O95461 756 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 WEE2P0C1S8 567 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 NHLH1Q02575 133 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 NCAPH2Q6IBW4 605 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 KANK3Q6NY19 840 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 MRPL43Q8N983 215 aaKnown RBP19.32■□□□□ 0.68
PDCD2-207ENST00000539212 CEP170P1Q96L14 293 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 LXNQ9BS40 222 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 GBP3Q9H0R5 595 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 ZBP1Q9H171 429 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 NRDE2Q9H7Z3 1164 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 RGL1Q9NZL6 768 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 DNAJB4Q9UDY4 337 aa19.32■□□□□ 0.68
PDCD2-207ENST00000539212 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.31■□□□□ 0.68
PDCD2-207ENST00000539212 ZBTB39O15060 712 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 CDKL5O76039 1030 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 ALDH7A1P49419 539 aaKnown RBP19.31■□□□□ 0.68
PDCD2-207ENST00000539212 AFF1P51825 1210 aaKnown RBP19.31■□□□□ 0.68
PDCD2-207ENST00000539212 FOSBP53539 338 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 POLGP54098 1239 aaPredicted RBP19.31■□□□□ 0.68
PDCD2-207ENST00000539212 AK2P54819 239 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 CYP4A11Q02928 519 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 NR5A1Q13285 461 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 FAM177A1Q8N128 213 aaPredicted RBP19.31■□□□□ 0.68
PDCD2-207ENST00000539212 NECAB1Q8N987 351 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 TMEM169Q96HH4 297 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 DYDC2Q96IM9 177 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 VN1R3Q9BXE9 311 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 AGPAT5Q9NUQ2 364 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 MYO10Q9HD67 2058 aa19.31■□□□□ 0.68
PDCD2-207ENST00000539212 OFD1O75665 1012 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 SRGAP2CP0DJJ0 459 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 SLC11A1P49279 550 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 CDC42EP1Q00587 391 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 SPIRE1Q08AE8 756 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 CTTNQ14247 550 aaKnown RBP19.3■□□□□ 0.68
PDCD2-207ENST00000539212 NOMO2Q5JPE7 1267 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 IER5LQ5T953 404 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 PPP4R3AQ6IN85 833 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 ZNF280BQ86YH2 543 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 VPS52Q8N1B4 723 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 C12orf76Q8N812 135 aaPredicted RBP19.3■□□□□ 0.68
PDCD2-207ENST00000539212 PRSS33Q8NF86 280 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 PRPF31Q8WWY3 499 aaKnown RBP19.3■□□□□ 0.68
PDCD2-207ENST00000539212 SLC7A3Q8WY07 619 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 CASP10Q92851 521 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 PBXIP1Q96AQ6 731 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 MFSD14AQ96MC6 490 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 FAM20AQ96MK3 541 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 TRAIPQ9BWF2 469 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 INO80BQ9C086 356 aaPredicted RBP19.3■□□□□ 0.68
PDCD2-207ENST00000539212 POMKQ9H5K3 350 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 DHX33Q9H6R0 707 aaKnown RBP19.3■□□□□ 0.68
PDCD2-207ENST00000539212 TSHZ2Q9NRE2 1034 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 PCDHB2Q9Y5E7 798 aa19.3■□□□□ 0.68
PDCD2-207ENST00000539212 CXCL14O95715 111 aa19.29■□□□□ 0.68
PDCD2-207ENST00000539212 P4HBP07237 508 aaKnown RBP19.29■□□□□ 0.68
PDCD2-207ENST00000539212 GALTP07902 379 aa19.29■□□□□ 0.68
PDCD2-207ENST00000539212 FDPSP14324 419 aaKnown RBP19.29■□□□□ 0.68
PDCD2-207ENST00000539212 GCFC2P16383 781 aaKnown RBP19.29■□□□□ 0.68
PDCD2-207ENST00000539212 EPCAMP16422 314 aa19.29■□□□□ 0.68
PDCD2-207ENST00000539212 YWHABP31946 246 aaKnown RBP19.29■□□□□ 0.68
PDCD2-207ENST00000539212 LAMTOR4Q0VGL1 99 aa19.29■□□□□ 0.68
PDCD2-207ENST00000539212 EMC2Q15006 297 aa19.29■□□□□ 0.68
PDCD2-207ENST00000539212 UBXN11Q5T124 520 aa19.29■□□□□ 0.68
PDCD2-207ENST00000539212 GLB1LQ6UWU2 654 aa19.29■□□□□ 0.68
PDCD2-207ENST00000539212 AGMOQ6ZNB7 445 aa19.29■□□□□ 0.68
PDCD2-207ENST00000539212 IGSF21Q96ID5 467 aa19.29■□□□□ 0.68
PDCD2-207ENST00000539212 JPH2Q9BR39 696 aaPredicted RBP19.29■□□□□ 0.68
PDCD2-207ENST00000539212 ORC3Q9UBD5 711 aaPredicted RBP19.29■□□□□ 0.68
PDCD2-207ENST00000539212 WNT7AO00755 349 aa19.28■□□□□ 0.68
PDCD2-207ENST00000539212 MARCH6O60337 910 aa19.28■□□□□ 0.68
PDCD2-207ENST00000539212 DDHD2O94830 711 aa19.28■□□□□ 0.68
PDCD2-207ENST00000539212 RAB27AP51159 221 aa19.28■□□□□ 0.68
PDCD2-207ENST00000539212 RNASELQ05823 741 aaKnown RBP19.28■□□□□ 0.68
PDCD2-207ENST00000539212 EPHA7Q15375 998 aa19.28■□□□□ 0.68
PDCD2-207ENST00000539212 PTPN21Q16825 1174 aa19.28■□□□□ 0.68
PDCD2-207ENST00000539212 RARS2Q5T160 578 aaKnown RBP19.28■□□□□ 0.68
PDCD2-207ENST00000539212 PSPC1Q8WXF1 523 aaKnown RBP19.28■□□□□ 0.68
PDCD2-207ENST00000539212 TNFRSF25Q93038 417 aa19.28■□□□□ 0.68
PDCD2-207ENST00000539212 ASIC4Q96FT7 647 aa19.28■□□□□ 0.68
PDCD2-207ENST00000539212 PHOX2BQ99453 314 aa19.28■□□□□ 0.68
PDCD2-207ENST00000539212 SMOC2Q9H3U7 446 aa19.28■□□□□ 0.68
PDCD2-207ENST00000539212 C2CD4DB7Z1M9 353 aa19.27■□□□□ 0.68
PDCD2-207ENST00000539212 ZNF623O75123 536 aa19.27■□□□□ 0.68
PDCD2-207ENST00000539212 SSBP05455 408 aaKnown RBP eCLIP19.27■□□□□ 0.68
PDCD2-207ENST00000539212 SKIP12755 728 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms