RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SEC16BQ96JE7 1060 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 WDR18Q9BV38 432 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 CPSF2Q9P2I0 782 aaKnown RBP19.43■□□□□ 0.7
RAB40C-203ENST00000535977 FEM1BQ9UK73 627 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 NFU1Q9UMS0 254 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 TRPC6Q9Y210 931 aa19.43■□□□□ 0.7
RAB40C-203ENST00000535977 UTRNP46939 3433 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 TGFB1I1O43294 461 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 JAM2P57087 298 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 BYSLQ13895 437 aaKnown RBP19.42■□□□□ 0.7
RAB40C-203ENST00000535977 CTTNQ14247 550 aaKnown RBP19.42■□□□□ 0.7
RAB40C-203ENST00000535977 RBBP5Q15291 538 aaKnown RBP19.42■□□□□ 0.7
RAB40C-203ENST00000535977 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 CAPRIN2Q6IMN6 1127 aaKnown RBP19.42■□□□□ 0.7
RAB40C-203ENST00000535977 RSBN1LQ6PCB5 846 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-203ENST00000535977 HS2ST1Q7LGA3 356 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 CD302Q8IX05 232 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.42■□□□□ 0.77e-7■■■■■ 86.8
RAB40C-203ENST00000535977 PSMB7Q99436 277 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 RBM12Q9NTZ6 932 aaKnown RBP19.42■□□□□ 0.7
RAB40C-203ENST00000535977 ZNF219Q9P2Y4 722 aaPredicted RBP19.42■□□□□ 0.7
RAB40C-203ENST00000535977 NAGPAQ9UK23 515 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 PCDHB13Q9Y5F0 798 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 CDC25CP30307 473 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 CARSP49589 748 aaKnown RBP19.42■□□□□ 0.7
RAB40C-203ENST00000535977 MYBPC2Q14324 1141 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 RPS6KA1Q15418 735 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 ALKBH5Q6P6C2 394 aaKnown RBP19.42■□□□□ 0.7
RAB40C-203ENST00000535977 FAM186BQ8IYM0 893 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 ZBTB21Q9ULJ3 1066 aa19.42■□□□□ 0.7
RAB40C-203ENST00000535977 FRMPD4Q14CM0 1322 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 HMGB1P1B2RPK0 211 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-203ENST00000535977 BACH1O14867 736 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 STAT1P42224 750 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 ECE1P42892 770 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 SNX1Q13596 522 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 DLGAP5Q15398 846 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 GPIHBP1Q8IV16 184 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 HVCN1Q96D96 273 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 RIT2Q99578 217 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 GCNT4Q9P109 453 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 ZNF70Q9UC06 446 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-203ENST00000535977 YDJCA8MPS7 323 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 DNAJC8O75937 253 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-203ENST00000535977 GUCY2FP51841 1108 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 NPEPPSP55786 919 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 TNNC1P63316 161 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 ZNF720Q7Z2F6 126 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 OGFOD1Q8N543 542 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 EIF1ADQ8N9N8 165 aaKnown RBP19.41■□□□□ 0.7
RAB40C-203ENST00000535977 PIGOQ8TEQ8 1089 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 ITFG2Q969R8 447 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 TEKT3Q9BXF9 490 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 SIX2Q9NPC8 291 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 GDF3Q9NR23 364 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 FRMD4BQ9Y2L6 1034 aa19.41■□□□□ 0.7
RAB40C-203ENST00000535977 TCP10L2B9ZVM9 353 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 FTCDO95954 541 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 CHRNA5P30532 468 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 PAK2Q13177 524 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 HIBCHQ6NVY1 386 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-203ENST00000535977 ACER1Q8TDN7 264 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 INPP4AQ96PE3 977 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-203ENST00000535977 ZNF577Q9BSK1 485 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 C15orf41Q9Y2V0 281 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 ESYT3A0FGR9 886 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 CASP4P49662 377 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 MIS18BP1Q6P0N0 1132 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 FAM178BQ8IXR5 827 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 SYCE1Q8N0S2 351 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 IFT81Q8WYA0 676 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 PDGFDQ9GZP0 370 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-203ENST00000535977 NENFQ9UMX5 172 aa19.4■□□□□ 0.7
RAB40C-203ENST00000535977 ZSCAN5CA6NGD5 496 aaPredicted RBP19.39■□□□□ 0.7
RAB40C-203ENST00000535977 CLIC2O15247 247 aa19.39■□□□□ 0.7
RAB40C-203ENST00000535977 TRAPPC3O43617 180 aa19.39■□□□□ 0.7
RAB40C-203ENST00000535977 GLI1P08151 1106 aa19.39■□□□□ 0.7
RAB40C-203ENST00000535977 H2AFZP0C0S5 128 aa19.39■□□□□ 0.7
RAB40C-203ENST00000535977 PECAM1P16284 738 aaPredicted RBP19.39■□□□□ 0.7
RAB40C-203ENST00000535977 ENOX2Q16206 610 aaKnown RBP19.39■□□□□ 0.7
RAB40C-203ENST00000535977 H2AFVQ71UI9 128 aa19.39■□□□□ 0.7
RAB40C-203ENST00000535977 SLC9A9Q8IVB4 645 aa19.39■□□□□ 0.7
RAB40C-203ENST00000535977 CACNA2D3Q8IZS8 1091 aa19.39■□□□□ 0.7
RAB40C-203ENST00000535977 C3orf20Q8ND61 904 aa19.39■□□□□ 0.7
RAB40C-203ENST00000535977 HOMER3Q9NSC5 361 aa19.39■□□□□ 0.7
RAB40C-203ENST00000535977 DMAC2Q9NW81 257 aa19.39■□□□□ 0.7
RAB40C-203ENST00000535977 SMNDC1O75940 238 aaKnown RBP eCLIP19.39■□□□□ 0.69
RAB40C-203ENST00000535977 ANP32DO95626 131 aa19.39■□□□□ 0.69
RAB40C-203ENST00000535977 BCRP11274 1271 aa19.39■□□□□ 0.69
RAB40C-203ENST00000535977 ALCAMQ13740 583 aa19.39■□□□□ 0.69
RAB40C-203ENST00000535977 CCDC174Q6PII3 467 aa19.39■□□□□ 0.69
RAB40C-203ENST00000535977 RTKN2Q8IZC4 609 aa19.39■□□□□ 0.69
RAB40C-203ENST00000535977 RBM46Q8TBY0 533 aaKnown RBP19.39■□□□□ 0.69
RAB40C-203ENST00000535977 VTI1AQ96AJ9 217 aa19.39■□□□□ 0.69
RAB40C-203ENST00000535977 MS4A14Q96JA4 679 aa19.39■□□□□ 0.69
RAB40C-203ENST00000535977 PACSIN1Q9BY11 444 aa19.39■□□□□ 0.69
RAB40C-203ENST00000535977 STK33Q9BYT3 514 aa19.39■□□□□ 0.69
RAB40C-203ENST00000535977 PSME4Q14997 1843 aa19.39■□□□□ 0.69
RAB40C-203ENST00000535977 PPP1R7Q15435 360 aa19.38■□□□□ 0.69
RAB40C-203ENST00000535977 SPDYE2Q495Y8 402 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms