RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 APPP05067 770 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 GYPEP15421 78 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 SDHAP31040 664 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 SEC24CP53992 1094 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 HDLBPQ00341 1268 aaKnown RBP1.46□□□□□ -2.18
COPB1-212ENST00000534771 FOXF2Q12947 444 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 TMEM132BQ14DG7 1078 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 METTL24Q5JXM2 366 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 YOD1Q5VVQ6 348 aaPredicted RBP1.46□□□□□ -2.18
COPB1-212ENST00000534771 FAM98AQ8NCA5 519 aaKnown RBP1.46□□□□□ -2.18
COPB1-212ENST00000534771 ST13P5Q8NFI4 369 aaPredicted RBP1.46□□□□□ -2.18
COPB1-212ENST00000534771 ZNF384Q8TF68 577 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 LINC00476Q8WZB0 136 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 SLC9A6Q92581 669 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 ANKS1AQ92625 1134 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 DLG3Q92796 817 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 ERCC4Q92889 916 aaPredicted RBP1.46□□□□□ -2.18
COPB1-212ENST00000534771 NKD2Q969F2 451 aaPredicted RBP1.46□□□□□ -2.18
COPB1-212ENST00000534771 E2F7Q96AV8 911 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 WBP1Q96G27 269 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 WDR92Q96MX6 357 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 IPO9Q96P70 1041 aaKnown RBP1.46□□□□□ -2.18
COPB1-212ENST00000534771 CPPED1Q9BRF8 314 aaPredicted RBP1.46□□□□□ -2.18
COPB1-212ENST00000534771 LRFN3Q9BTN0 628 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 SLC46A2Q9BY10 475 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 EPC1Q9H2F5 836 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 ZNF768Q9H5H4 540 aaKnown RBP1.46□□□□□ -2.18
COPB1-212ENST00000534771 CAPN10Q9HC96 672 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 SMURF1Q9HCE7 757 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 SYNPO2Q9UMS6 1093 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 FRMD4BQ9Y2L6 1034 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 PCDHA9Q9Y5H5 950 aa1.46□□□□□ -2.18
COPB1-212ENST00000534771 SLC12A8A0AV02 714 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 GAGE12BA1L429 117 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 GAGE12HA6NDE8 117 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 DNAJC9-AS1A6NH13 148 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 AHRRA9YTQ3 701 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 RNASET2O00584 256 aaKnown RBP1.45□□□□□ -2.18
COPB1-212ENST00000534771 TRIM38O00635 465 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 NCR1O76036 304 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 NDUFA10O95299 355 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 IGLV2-14P01704 120 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 BMPR1AP36894 532 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 ABCG1P45844 678 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 PTTG1IPP53801 180 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 GABREP78334 506 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 FAM189BP81408 668 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 ROM1Q03395 351 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 VPS72Q15906 364 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 ABHD17BQ5VST6 288 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 LRP10Q7Z4F1 713 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 GDF7Q7Z4P5 450 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 BRAPQ7Z569 592 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 CLEC14AQ86T13 490 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 NOSTRINQ8IVI9 506 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 SRRM1Q8IYB3 904 aaKnown RBP1.45□□□□□ -2.18
COPB1-212ENST00000534771 LILRA3Q8N6C8 439 aaPredicted RBP1.45□□□□□ -2.18
COPB1-212ENST00000534771 CELF2-AS1Q8N7Q2 184 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 GLB1L3Q8NCI6 653 aaPredicted RBP1.45□□□□□ -2.18
COPB1-212ENST00000534771 FOXRED1Q96CU9 486 aaPredicted RBP1.45□□□□□ -2.18
COPB1-212ENST00000534771 CDC6Q99741 560 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 FOXB1Q99853 325 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 BUD13Q9BRD0 619 aaKnown RBP eCLIP1.45□□□□□ -2.189e-6■□□□□ 9.3
COPB1-212ENST00000534771 PDCD2LQ9BRP1 358 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 NDC1Q9BTX1 674 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 HAPLN2Q9GZV7 340 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 CCSER2Q9H7U1 834 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 C14orf93Q9H972 538 aaKnown RBP1.45□□□□□ -2.18
COPB1-212ENST00000534771 ZNF408Q9H9D4 720 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 AKIP1Q9NQ31 210 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 TRPM5Q9NZQ8 1165 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 KCMF1Q9P0J7 381 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 DKK2Q9UBU2 259 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 TLK1Q9UKI8 766 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.45□□□□□ -2.18
COPB1-212ENST00000534771 HDAC5Q9UQL6 1122 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 B3GALT1Q9Y5Z6 326 aa1.45□□□□□ -2.18
COPB1-212ENST00000534771 DIRC3C9JPN6 131 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 PRR23D1E9PI22 279 aaPredicted RBP1.44□□□□□ -2.18
COPB1-212ENST00000534771 MAFGO15525 162 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 DNAJC6O75061 913 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 HIP1RO75146 1068 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 RBMXL2O75526 392 aaKnown RBP1.44□□□□□ -2.18
COPB1-212ENST00000534771 STC2O76061 302 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 RASGRP1O95267 797 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 MATN4O95460 622 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 ESRRBO95718 433 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 CRTAMO95727 393 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 HLA-DOAP06340 250 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 PRR23D2P0DMB1 279 aaPredicted RBP1.44□□□□□ -2.18
COPB1-212ENST00000534771 HNRNPLP14866 589 aaKnown RBP eCLIP1.44□□□□□ -2.18
COPB1-212ENST00000534771 TYRP1P17643 537 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 APOBEC3AP31941 199 aaPredicted RBP1.44□□□□□ -2.18
COPB1-212ENST00000534771 PLA2G5P39877 138 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 MPLP40238 635 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 RGS3P49796 1198 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 BLOC1S1P78537 153 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 SLC6A3Q01959 620 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 GUCY1B3Q02153 619 aa1.44□□□□□ -2.18
COPB1-212ENST00000534771 NHLH1Q02575 133 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms