RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 AFAP1L1Q8TED9 768 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 TMEM143Q96AN5 459 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 FBXL5Q9UKA1 691 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 DUSP10Q9Y6W6 482 aa18.39■□□□□ 0.53
SREK1-212ENST00000522912 CELF2O95319 508 aaKnown RBP18.38■□□□□ 0.53
SREK1-212ENST00000522912 KRT13P13646 458 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 ARID5AQ03989 594 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 ASIC2Q16515 512 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 C1orf220Q5T0J3 134 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 TMEM63BQ5T3F8 832 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 FAM160B1Q5W0V3 765 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 CCDC62Q6P9F0 684 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 INTS8Q75QN2 995 aaKnown RBP18.38■□□□□ 0.53
SREK1-212ENST00000522912 IRF2BP2Q7Z5L9 587 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 ANKRD23Q86SG2 305 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 IFT74Q96LB3 600 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 ARHGAP28Q9P2N2 729 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.38■□□□□ 0.53
SREK1-212ENST00000522912 MRFAP1Q9Y605 127 aa18.38■□□□□ 0.53
SREK1-212ENST00000522912 V9GYY5 206 aaPredicted RBP18.38■□□□□ 0.53
SREK1-212ENST00000522912 GOLGA8IPA6NC78 632 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 GOLGA8JA6NMD2 632 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 MAPK13O15264 365 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 KRT86O43790 486 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 ADRB2P07550 413 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 VAMP7P51809 220 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 JAM2P57087 298 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 GFPT1Q06210 699 aaPredicted RBP18.37■□□□□ 0.53
SREK1-212ENST00000522912 HSDL1Q3SXM5 330 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 IQCEQ6IPM2 695 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 C2orf69Q8N8R5 385 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 ASAP3Q8TDY4 903 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 GPR20Q99678 358 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 IFIH1Q9BYX4 1025 aaKnown RBP18.37■□□□□ 0.53
SREK1-212ENST00000522912 PDGFCQ9NRA1 345 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 RBAK-RBAKDNI3L0D1 243 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 CCNA1P78396 465 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 MYL7Q01449 175 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 SPRYD7Q5W111 196 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 COPS5Q92905 334 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 SPAG5Q96R06 1193 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 NRBP2Q9NSY0 501 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 MYO6Q9UM54 1294 aa18.37■□□□□ 0.53
SREK1-212ENST00000522912 SIP14410 1827 aa18.36■□□□□ 0.53
SREK1-212ENST00000522912 EMSYQ7Z589 1322 aa18.36■□□□□ 0.53
SREK1-212ENST00000522912 LOC102724159A0A0B4J2E5 919 aa18.36■□□□□ 0.53
SREK1-212ENST00000522912 CTAGE9A4FU28 777 aa18.36■□□□□ 0.53
SREK1-212ENST00000522912 GLRA2P23416 452 aa18.36■□□□□ 0.53
SREK1-212ENST00000522912 ARL2P36404 184 aa18.36■□□□□ 0.53
SREK1-212ENST00000522912 PPP3CAQ08209 521 aa18.36■□□□□ 0.53
SREK1-212ENST00000522912 KLHL30Q0D2K2 578 aa18.36■□□□□ 0.53
SREK1-212ENST00000522912 PWP2Q15269 919 aaKnown RBP18.36■□□□□ 0.53
SREK1-212ENST00000522912 ZNF792Q3KQV3 632 aa18.36■□□□□ 0.53
SREK1-212ENST00000522912 CARD6Q9BX69 1037 aa18.36■□□□□ 0.53
SREK1-212ENST00000522912 INTS2Q9H0H0 1204 aaKnown RBP18.36■□□□□ 0.53
SREK1-212ENST00000522912 ASB14A6NK59 587 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 LGR5O75473 907 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 MCCD1P59942 119 aaPredicted RBP18.35■□□□□ 0.53
SREK1-212ENST00000522912 KIF5AQ12840 1032 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 ENOX2Q16206 610 aaKnown RBP18.35■□□□□ 0.53
SREK1-212ENST00000522912 ARMCX2Q7L311 632 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 CBWD2Q8IUF1 395 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 LMO3Q8TAP4 145 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 ANKRD7Q92527 254 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 SAAL1Q96ER3 474 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 NAPGQ99747 312 aaPredicted RBP18.35■□□□□ 0.53
SREK1-212ENST00000522912 PTPN18Q99952 460 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 MORF4L1Q9UBU8 362 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 ADORA2AP29274 412 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 RFC5P40937 340 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 MAGEA1P43355 309 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 GCLCP48506 637 aaPredicted RBP18.35■□□□□ 0.53
SREK1-212ENST00000522912 TRIM50Q86XT4 487 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 DHX37Q8IY37 1157 aaKnown RBP18.35■□□□□ 0.53
SREK1-212ENST00000522912 SLC7A3Q8WY07 619 aa18.35■□□□□ 0.53
SREK1-212ENST00000522912 MYH10P35580 1976 aa18.34■□□□□ 0.53
SREK1-212ENST00000522912 TXNP10599 105 aaKnown RBP18.34■□□□□ 0.53
SREK1-212ENST00000522912 SNRNP35Q16560 246 aaKnown RBP18.34■□□□□ 0.53
SREK1-212ENST00000522912 BRDTQ58F21 947 aaPredicted RBP18.34■□□□□ 0.53
SREK1-212ENST00000522912 EHBP1Q8NDI1 1231 aa18.34■□□□□ 0.53
SREK1-212ENST00000522912 FBXL18Q96ME1 805 aa18.34■□□□□ 0.53
SREK1-212ENST00000522912 SPATA33Q96N06 139 aa18.34■□□□□ 0.53
SREK1-212ENST00000522912 TSGA10Q9BZW7 698 aa18.34■□□□□ 0.53
SREK1-212ENST00000522912 AZI2Q9H6S1 392 aa18.34■□□□□ 0.53
SREK1-212ENST00000522912 A0A087X0T9 212 aa18.33■□□□□ 0.53
SREK1-212ENST00000522912 H0YCG3 227 aa18.33■□□□□ 0.53
SREK1-212ENST00000522912 NOP56O00567 594 aaKnown RBP18.33■□□□□ 0.53
SREK1-212ENST00000522912 HNRNPDLO14979 420 aaKnown RBP18.33■□□□□ 0.53
SREK1-212ENST00000522912 PJA2O43164 708 aa18.33■□□□□ 0.53
SREK1-212ENST00000522912 FAM228BP0C875 321 aa18.33■□□□□ 0.53
SREK1-212ENST00000522912 PNMA6AP0CW24 399 aaPredicted RBP18.33■□□□□ 0.53
SREK1-212ENST00000522912 MARK3P27448 753 aa18.33■□□□□ 0.53
SREK1-212ENST00000522912 GCLMP48507 274 aa18.33■□□□□ 0.53
SREK1-212ENST00000522912 PTK2Q05397 1052 aa18.33■□□□□ 0.53
SREK1-212ENST00000522912 CST9Q5W186 159 aa18.33■□□□□ 0.53
SREK1-212ENST00000522912 ZNF571Q7Z3V5 609 aaPredicted RBP18.33■□□□□ 0.53
SREK1-212ENST00000522912 POMGNT1Q8WZA1 660 aa18.33■□□□□ 0.53
SREK1-212ENST00000522912 GLG1Q92896 1179 aa18.33■□□□□ 0.53
SREK1-212ENST00000522912 DNAJC12Q9UKB3 198 aa18.33■□□□□ 0.53
SREK1-212ENST00000522912 USP20Q9Y2K6 914 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms