RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 IGBP1P78318 339 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SATB1Q01826 763 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SP4Q02446 784 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PTH1RQ03431 593 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CSTF1Q05048 431 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ITIH3Q06033 890 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TBC1D8BQ0IIM8 1120 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TROAPQ12815 778 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NFX1Q12986 1120 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PPFIA1Q13136 1202 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NMIQ13287 307 aaPredicted RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 OS9Q13438 667 aaPredicted RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GRM4Q14833 912 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TARBP2Q15633 366 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NAB2Q15742 525 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 UGCGQ16739 394 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 UBE2SQ16763 222 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 KIZQ2M2Z5 673 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SLC5A9Q2M3M2 681 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZNF528Q3MIS6 628 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SLC44A4Q53GD3 710 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RRP12Q5JTH9 1297 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ARHGEF16Q5VV41 709 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PCNX4Q63HM2 1172 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 LARP1BQ659C4 914 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SCARA3Q6AZY7 606 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TANGO2Q6ICL3 276 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 DCLRE1AQ6PJP8 1040 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TXNDC11Q6PKC3 985 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 C19orf48Q6RUI8 117 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 B3GNT9Q6UX72 402 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MAMSTRQ6ZN01 415 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PRR23CQ6ZRP0 262 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 Q6ZS52 159 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SLC24A5Q71RS6 500 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MRPL10Q7Z7H8 261 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 DDX53Q86TM3 631 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FCHSD1Q86WN1 690 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TMC8Q8IU68 726 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GPIHBP1Q8IV16 184 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 KSR1Q8IVT5 923 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CCDC60Q8IWA6 550 aaPredicted RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ITPRIPQ8IWB1 547 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 VPS52Q8N1B4 723 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CLASRPQ8N2M8 674 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SRBD1Q8N5C6 995 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FAM160A2Q8N612 972 aaPredicted RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CCDC155Q8N6L0 562 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TDRD5Q8NAT2 981 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SMG8Q8ND04 991 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PNMA1Q8ND90 353 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CMASQ8NFW8 434 aaPredicted RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RIN3Q8TB24 985 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HELQQ8TDG4 1101 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 KCNG4Q8TDN1 519 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 IGDCC4Q8TDY8 1250 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MICAL1Q8TDZ2 1067 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RABGGTAQ92696 567 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CASP10Q92851 521 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GJA10Q969M2 543 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 LENG9Q96B70 501 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TCEAL4Q96EI5 215 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 IGSF21Q96ID5 467 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 PGBD1Q96JS3 809 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TTC14Q96N46 770 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MBOAT7Q96N66 472 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CRBNQ96SW2 442 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CDCA3Q99618 268 aaPredicted RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 OSMRQ99650 979 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SENP7Q9BQF6 1050 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RTP3Q9BQQ7 232 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CLSTN3Q9BQT9 956 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SH2D3AQ9BRG2 576 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RTKNQ9BST9 563 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 MKNK1Q9BUB5 465 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 LSM14BQ9BX40 385 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 USP26Q9BXU7 913 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 LRRC3Q9BY71 257 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RHOBTB2Q9BYZ6 727 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 GPR62Q9BZJ7 368 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TMEM117Q9H0C3 514 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 NT5C3AQ9H0P0 336 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 IRF2BPLQ9H1B7 796 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SEMA4AQ9H3S1 761 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ELAC1Q9H777 363 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RXFP1Q9HBX9 757 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FBRSL1Q9HCM7 1045 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 LTB4R2Q9NPC1 389 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ARHGEF3Q9NR81 526 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CHST12Q9NRB3 414 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HEBP1Q9NRV9 189 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 CHST7Q9NS84 486 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 SEMA4GQ9NTN9 838 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ECHDC1Q9NTX5 307 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 FAM217BQ9NTX9 383 aaPredicted RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 RBM12Q9NTZ6 932 aaKnown RBP1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TBC1D13Q9NVG8 400 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 HCFC1R1Q9NWW0 138 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 TMEM161AQ9NX61 479 aa1.37□□□□□ -2.19
RNU4ATAC11P-201ENST00000515939 ZSCAN32Q9NX65 697 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms