RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 PPP2R3AQ06190 1150 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 MAPK7Q13164 816 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 DUSP28Q4G0W2 176 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 XKR9Q5GH70 373 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 KLHL10Q6JEL2 608 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 SWSAP1Q6NVH7 229 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 SFR1Q86XK3 245 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 FBXO16Q8IX29 292 aaPredicted RBP10.03□□□□□ -0.8
NR1I3-230ENST00000511944 SMYD4Q8IYR2 804 aaPredicted RBP10.03□□□□□ -0.8
NR1I3-230ENST00000511944 CSGALNACT2Q8N6G5 542 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 IQCDQ96DY2 449 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 CAPNS2Q96L46 248 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 TRIM47Q96LD4 638 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 SPATA33Q96N06 139 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 UIMC1Q96RL1 719 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 NTPCRQ9BSD7 190 aaKnown RBP10.03□□□□□ -0.8
NR1I3-230ENST00000511944 STRA6Q9BX79 667 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 KLF16Q9BXK1 252 aaPredicted RBP10.03□□□□□ -0.8
NR1I3-230ENST00000511944 SMARCAD1Q9H4L7 1026 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 SLC39A2Q9NP94 309 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 CYP26B1Q9NR63 512 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 PLXNA1Q9UIW2 1896 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 WASF2Q9Y6W5 498 aa10.03□□□□□ -0.8
NR1I3-230ENST00000511944 COL1A2P08123 1366 aa10.02□□□□□ -0.8
NR1I3-230ENST00000511944 A0A1B0GTH6 734 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 TNPO2O14787 897 aaKnown RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 AP5Z1O43299 807 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 PPFIA4O75335 1185 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 SNAI1O95863 264 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 SERPINC1P01008 464 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 TPM2P07951 284 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 CDK11BP21127 795 aaKnown RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 RPL13P26373 211 aaKnown RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 SMTNP53814 917 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 NCKAP1LP55160 1127 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 GSDMDP57764 484 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 LACTBP83111 547 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 ARHGAP1Q07960 439 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 ACVR2BQ13705 512 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 PPP2R5AQ15172 486 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 TARBP2Q15633 366 aaKnown RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 KNOP1Q1ED39 458 aaKnown RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 FILIP1LQ4L180 1135 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 TCP11X2Q5H9J9 407 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 ODR4Q5SWX8 454 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 ZNF720Q7Z2F6 126 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 FAM178BQ8IXR5 827 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 DAW1Q8N136 415 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 ZNF784Q8NCA9 323 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 ATP8B4Q8TF62 1192 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 SCFD1Q8WVM8 642 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 SLC7A3Q8WY07 619 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 TRIM44Q96DX7 344 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 CEP170P1Q96L14 293 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 FIZ1Q96SL8 496 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 KCTD10Q9H3F6 313 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 DHX33Q9H6R0 707 aaKnown RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 TMEM206Q9H813 350 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 MRPL44Q9H9J2 332 aaKnown RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 ATP6V0A4Q9HBG4 840 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 TYW1Q9NV66 732 aaKnown RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 SAGE1Q9NXZ1 904 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 MAGEC2Q9UBF1 373 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 GJD2Q9UKL4 321 aa10.02□□□□□ -0.81
NR1I3-230ENST00000511944 ZNF215Q9UL58 517 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-230ENST00000511944 SLC16A3O15427 465 aaKnown RBP10.01□□□□□ -0.81
NR1I3-230ENST00000511944 CALUO43852 315 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-230ENST00000511944 HBP1O60381 514 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 USO1O60763 962 aaKnown RBP10.01□□□□□ -0.81
NR1I3-230ENST00000511944 HIP1RO75146 1068 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 ARIH2O95376 493 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 YY1P25490 414 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 UBASH3AP57075 661 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 RAB15P59190 212 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 ENPEPQ07075 957 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 DMP1Q13316 513 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-230ENST00000511944 KIF22Q14807 665 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 ARHGEF6Q15052 776 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 LY6KQ17RY6 165 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 HSDL1Q3SXM5 330 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 ANKRD40Q6AI12 368 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 CYP4F22Q6NT55 531 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 LRRC55Q6ZSA7 311 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 HS2ST1Q7LGA3 356 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 FILIP1Q7Z7B0 1213 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 SLC9A9Q8IVB4 645 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 C12orf56Q8IXR9 622 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 PHTF2Q8N3S3 785 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 MYCT1Q8N699 235 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 NPLOC4Q8TAT6 608 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 PCYT2Q99447 389 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 DUSP9Q99956 384 aaKnown RBP10.01□□□□□ -0.81
NR1I3-230ENST00000511944 MKNK1Q9BUB5 465 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 SEMA6BQ9H3T3 888 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 SAMSN1Q9NSI8 373 aaKnown RBP10.01□□□□□ -0.81
NR1I3-230ENST00000511944 ERAP1Q9NZ08 941 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 EXOC7Q9UPT5 735 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 ITIH6Q6UXX5 1313 aa10.01□□□□□ -0.81
NR1I3-230ENST00000511944 ZNFX1Q9P2E3 1918 aaKnown RBP10□□□□□ -0.81
NR1I3-230ENST00000511944 NPHP3-ACAD11A0A0J9YXS1 232 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms