RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 KIR2DL3P43628 341 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 HHEXQ03014 270 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 CD69Q07108 199 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 GAGE13Q4V321 117 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 MIIPQ5JXC2 388 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 FAM111BQ6SJ93 734 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 RNF180Q86T96 592 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 CXorf67Q86X51 503 aaPredicted RBP6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 THNSL2Q86YJ6 484 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 HIST1H2AHQ96KK5 128 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 HIST1H2AJQ99878 128 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 FDXACB1Q9BRP7 624 aaPredicted RBP6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 ING3Q9NXR8 418 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 USP36Q9P275 1121 aaKnown RBP6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 RCAN3Q9UKA8 241 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 MAPRE3Q9UPY8 281 aa6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.34
UBE2D3-218ENST00000505009 STC2O76061 302 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 DDB1Q16531 1140 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 Q6ZRM9 215 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 STRA8Q7Z7C7 330 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 LYSMD2Q8IV50 215 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 ZFPM1Q8IX07 1006 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 PPP1R14CQ8TAE6 165 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 SLC5A5Q92911 643 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 UIMC1Q96RL1 719 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 TCF25Q9BQ70 676 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 OSBPL6Q9BZF3 934 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 SLKQ9H2G2 1235 aaPredicted RBP6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 C14orf93Q9H972 538 aaKnown RBP6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 TMPRSS11EQ9UL52 423 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 HS3ST3A1Q9Y663 406 aa6.64□□□□□ -1.35
UBE2D3-218ENST00000505009 ST20-MTHFSA0A0A6YYL1 179 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 NEMP1O14524 444 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 KDM1AO60341 852 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 CLSTN1O94985 981 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 CFBP00751 764 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 SLPIP03973 132 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 JUNP05412 331 aaKnown RBP6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 BPIP17213 487 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 ACVRL1P37023 503 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 SCNN1GP51170 649 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 MANFP55145 182 aaKnown RBP6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 PTH1RQ03431 593 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 ELAVL1Q15717 326 aaKnown RBP6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 ATP13A4Q4VNC1 1196 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 C11orf74Q86VG3 221 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 MPHOSPH9Q99550 1183 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 CSRNP2Q9H175 543 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 GIT1Q9Y2X7 761 aa6.63□□□□□ -1.35
UBE2D3-218ENST00000505009 FZD7O75084 574 aa6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 SEC24DO94855 1032 aaPredicted RBP6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 LY86O95711 162 aa6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 TRIM25Q14258 630 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 RRP1BQ14684 758 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 FKBP15Q5T1M5 1219 aa6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 CCDC62Q6P9F0 684 aa6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 ELOA2Q8IYF1 753 aaPredicted RBP6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 CDYL2Q8N8U2 506 aa6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 CACTINQ8WUQ7 758 aaKnown RBP6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 GAB3Q8WWW8 586 aa6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 PLEKHG4BQ96PX9 1271 aa6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 CEP72Q9P209 647 aa6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 ING1Q9UK53 422 aaPredicted RBP6.62□□□□□ -1.35
UBE2D3-218ENST00000505009 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 ALDH1A2O94788 518 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 FSBPO95073 299 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 HSD3B2P26439 372 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 GDF5P43026 501 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 PPARAQ07869 468 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 STRN3Q13033 797 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 KLF10Q13118 480 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 CRHR2Q13324 411 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 PDCD1Q15116 288 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 DHCR24Q15392 516 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 MAN2A1Q16706 1144 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 FAM214AQ32MH5 1076 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 SDE2Q6IQ49 451 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 FRMD7Q6ZUT3 714 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 CMTM4Q8IZR5 234 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 MSL3Q8N5Y2 521 aaKnown RBP6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 USP7Q93009 1102 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 MIEF2Q96C03 454 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 ZNF512Q96ME7 567 aaPredicted RBP6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 SRRDQ9UH36 339 aa6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 EVLQ9UI08 416 aaPredicted RBP6.61□□□□□ -1.35
UBE2D3-218ENST00000505009 MTSS1O43312 755 aa6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 RAB11FIP3O75154 756 aa6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 LPLP06858 475 aa6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 MGAT5Q09328 741 aa6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 SPIDRQ14159 915 aa6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 LSM12Q3MHD2 195 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 CT83Q5H943 113 aa6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 PITRM1Q5JRX3 1037 aa6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 SLC41A1Q8IVJ1 513 aa6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 UNC5BQ8IZJ1 945 aa6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 THEMISQ8N1K5 641 aaPredicted RBP6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 ANKRD35Q8N283 1001 aa6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 MB21D1Q8N884 522 aa6.6□□□□□ -1.35
UBE2D3-218ENST00000505009 CLRN3Q8NCR9 226 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms