RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 ARHGEF19Q8IW93 802 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 ZDHHC14Q8IZN3 488 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 RAPGEF5Q92565 580 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 SLC5A5Q92911 643 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 KAT5Q92993 513 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 PRMT6Q96LA8 375 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-217ENST00000495688 LXNQ9BS40 222 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 MKNK1Q9BUB5 465 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 EPB41L4BQ9H329 900 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 UBE2TQ9NPD8 197 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-217ENST00000495688 FAM114A2Q9NRY5 505 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 ZDHHC18Q9NUE0 388 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 DDX20Q9UHI6 824 aaKnown RBP14.09□□□□□ -0.15
PTPN7-217ENST00000495688 TTC7AQ9ULT0 858 aaPredicted RBP14.09□□□□□ -0.15
PTPN7-217ENST00000495688 ALG6Q9Y672 507 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 STK24Q9Y6E0 443 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 ATP8B3O60423 1300 aa14.09□□□□□ -0.15
PTPN7-217ENST00000495688 ATMINO43313 823 aaPredicted RBP14.08□□□□□ -0.15
PTPN7-217ENST00000495688 ECE2O60344 883 aa14.08□□□□□ -0.15
PTPN7-217ENST00000495688 HIP1RO75146 1068 aa14.08□□□□□ -0.15
PTPN7-217ENST00000495688 KRT13P13646 458 aa14.08□□□□□ -0.15
PTPN7-217ENST00000495688 IFFO1Q0D2I5 559 aa14.08□□□□□ -0.15
PTPN7-217ENST00000495688 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.15
PTPN7-217ENST00000495688 C6orf89Q6UWU4 347 aa14.08□□□□□ -0.15
PTPN7-217ENST00000495688 PRPF38AQ8NAV1 312 aaKnown RBP14.08□□□□□ -0.15
PTPN7-217ENST00000495688 FBXO25Q8TCJ0 367 aa14.08□□□□□ -0.15
PTPN7-217ENST00000495688 ERP44Q9BS26 406 aa14.08□□□□□ -0.15
PTPN7-217ENST00000495688 ZNF577Q9BSK1 485 aa14.08□□□□□ -0.15
PTPN7-217ENST00000495688 PAGR1Q9BTK6 254 aa14.08□□□□□ -0.15
PTPN7-217ENST00000495688 CARD9Q9H257 536 aa14.08□□□□□ -0.15
PTPN7-217ENST00000495688 SMIM23A6NLE4 172 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 PHF20L1A8MW92 1017 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 ALDH1B1P30837 517 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 PPP3CAQ08209 521 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 MAPK7Q13164 816 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 LLGL1Q15334 1064 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 CEP55Q53EZ4 464 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 STRIP1Q5VSL9 837 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 DUPD1Q68J44 220 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 CNPY4Q8N129 248 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 UHMK1Q8TAS1 419 aaKnown RBP14.08□□□□□ -0.16
PTPN7-217ENST00000495688 TXLNGYQ9BZA5 131 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 DAAM1Q9Y4D1 1078 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 EMSYQ7Z589 1322 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 ATXN2Q99700 1313 aaKnown RBP14.08□□□□□ -0.16
PTPN7-217ENST00000495688 ANKRD62A6NC57 917 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 FSBPO95073 299 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 FTLP02792 175 aaPredicted RBP14.08□□□□□ -0.16
PTPN7-217ENST00000495688 VCAM1P19320 739 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 USP8P40818 1118 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 GCLMP48507 274 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 NFIL3Q16649 462 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 MICALCLQ6ZW33 695 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 JAMLQ86YT9 394 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 ELMO3Q96BJ8 720 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 NACC1Q96RE7 527 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 AGPAT1Q99943 283 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 TMX4Q9H1E5 349 aaPredicted RBP14.08□□□□□ -0.16
PTPN7-217ENST00000495688 CTTNBP2NLQ9P2B4 639 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 PNMA2Q9UL42 364 aa14.08□□□□□ -0.16
PTPN7-217ENST00000495688 PPFIA2O75334 1257 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 POLR2MP0CAP2 368 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 AGBL2Q5U5Z8 902 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 SPATS2Q86XZ4 545 aaKnown RBP14.07□□□□□ -0.16
PTPN7-217ENST00000495688 CBWD1Q9BRT8 395 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 FBXO28Q9NVF7 368 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 RBBP6Q7Z6E9 1792 aaKnown RBP14.07□□□□□ -0.16
PTPN7-217ENST00000495688 TCRBV7S2A1N4TA0A589 114 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 TLDC2A0PJX2 215 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 K7ENM7 598 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 KIF22Q14807 665 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 PPP2R5AQ15172 486 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 SLC27A3Q5K4L6 730 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 MSL1Q68DK7 614 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 TTC27Q6P3X3 843 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 ZDHHC24Q6UX98 284 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 YTHDF3Q7Z739 585 aaKnown RBP14.07□□□□□ -0.16
PTPN7-217ENST00000495688 SUGP1Q8IWZ8 645 aaKnown RBP14.07□□□□□ -0.16
PTPN7-217ENST00000495688 CCDC13Q8IYE1 715 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 BTBD6Q96KE9 485 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 PSMD1Q99460 953 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 OSBPL7Q9BZF2 842 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 RAB17Q9H0T7 212 aa14.07□□□□□ -0.16
PTPN7-217ENST00000495688 ARHGEF35A5YM69 484 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 TMEM150BA6NC51 233 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 TCP10L2B9ZVM9 353 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 IPO5O00410 1097 aaKnown RBP14.06□□□□□ -0.16
PTPN7-217ENST00000495688 KIAA0391O15091 583 aaKnown RBP14.06□□□□□ -0.16
PTPN7-217ENST00000495688 BYSLQ13895 437 aaKnown RBP14.06□□□□□ -0.16
PTPN7-217ENST00000495688 COL23A1Q86Y22 540 aaPredicted RBP14.06□□□□□ -0.16
PTPN7-217ENST00000495688 RPUSD2Q8IZ73 545 aaKnown RBP14.06□□□□□ -0.16
PTPN7-217ENST00000495688 RNF25Q96BH1 459 aaPredicted RBP14.06□□□□□ -0.16
PTPN7-217ENST00000495688 COL11A2P13942 1736 aaPredicted RBP14.06□□□□□ -0.16
PTPN7-217ENST00000495688 MMP10P09238 476 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 MNAT1P51948 309 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 MESDQ14696 234 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 AOC3Q16853 763 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 PRELID2Q8N945 189 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 PLEKHO2Q8TD55 490 aa14.06□□□□□ -0.16
PTPN7-217ENST00000495688 PCDHB18PQ96TA0 734 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms