RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 LINC00482Q8N8I6 264 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 PHOSPHO1Q8TCT1 267 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 ADAMTS17Q8TE56 1095 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 DIS3LQ8TF46 1054 aaKnown RBP5.69□□□□□ -1.5
VPS13A-211ENST00000484581 EVI5LQ96CN4 794 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 ZNF496Q96IT1 587 aaPredicted RBP5.69□□□□□ -1.5
VPS13A-211ENST00000484581 GTPBP4Q9BZE4 634 aaKnown RBP5.69□□□□□ -1.5
VPS13A-211ENST00000484581 AP5M1Q9H0R1 490 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 QRSL1Q9H0R6 528 aaKnown RBP5.69□□□□□ -1.5
VPS13A-211ENST00000484581 SMOC1Q9H4F8 434 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 FAM204AQ9H8W3 233 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 KLHL11Q9NVR0 708 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 PHTF1Q9UMS5 762 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 SIT1Q9Y3P8 196 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 RASSF10A6NK89 507 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 TPP1O14773 563 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 FOXP2O15409 715 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 NDUFS2O75306 463 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 PPFIA4O75335 1185 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 C4BPAP04003 597 aaKnown RBP5.68□□□□□ -1.5
VPS13A-211ENST00000484581 HRGP04196 525 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 POU2F2P09086 479 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 OSMP13725 252 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 PTPN1P18031 435 aaKnown RBP5.68□□□□□ -1.5
VPS13A-211ENST00000484581 SLC5A3P53794 718 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 UGT8Q16880 541 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 STEAP3Q658P3 488 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 CD300LDQ6UXZ3 194 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 ETV3LQ6ZN32 361 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.68□□□□□ -1.5
VPS13A-211ENST00000484581 PHYKPLQ8IUZ5 450 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 C7orf31Q8N865 590 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 RAX2Q96IS3 184 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 LOXL4Q96JB6 756 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 MAML3Q96JK9 1138 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 MAP3K14Q99558 947 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 PDGFDQ9GZP0 370 aaPredicted RBP5.68□□□□□ -1.5
VPS13A-211ENST00000484581 PUF60Q9UHX1 559 aaKnown RBP5.68□□□□□ -1.5
VPS13A-211ENST00000484581 TUBD1Q9UJT1 453 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 DAAM1Q9Y4D1 1078 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 PPP2R3BQ9Y5P8 575 aa5.68□□□□□ -1.5
VPS13A-211ENST00000484581 A6NNZ2 444 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 FAM227AF5H4B4 570 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 DTNBO60941 627 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 TADA3O75528 432 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 PAX3P23760 479 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 ADAM17P78536 824 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 CT83Q5H943 113 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 ZC3H18Q86VM9 953 aaKnown RBP5.67□□□□□ -1.5
VPS13A-211ENST00000484581 TTLL6Q8N841 843 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 ZBTB34Q8NCN2 500 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 PPM1EQ8WY54 764 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 ACO2Q99798 780 aaKnown RBP5.67□□□□□ -1.5
VPS13A-211ENST00000484581 GORASP1Q9BQQ3 440 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 C11orf84Q9BUA3 381 aaPredicted RBP5.67□□□□□ -1.5
VPS13A-211ENST00000484581 PRDM16Q9HAZ2 1276 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 ASH2LQ9UBL3 628 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 TELO2Q9Y4R8 837 aa5.67□□□□□ -1.5
VPS13A-211ENST00000484581 UBA6A0AVT1 1052 aaPredicted RBP5.66□□□□□ -1.5
VPS13A-211ENST00000484581 PRAMEF25A6NGN4 478 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 FAM90A27PA6NNH2 459 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 HGSO14964 777 aaPredicted RBP5.66□□□□□ -1.5
VPS13A-211ENST00000484581 SLC27A2O14975 620 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 PLATP00750 562 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 C8BP07358 591 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 RPL13P26373 211 aaKnown RBP5.66□□□□□ -1.5
VPS13A-211ENST00000484581 SERPINB3P29508 390 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 HERVK_113P62684 666 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 KIF23Q02241 960 aaPredicted RBP5.66□□□□□ -1.5
VPS13A-211ENST00000484581 TUSC3Q13454 348 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 ZBTB41Q5SVQ8 909 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 FAM83BQ5T0W9 1011 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 MBNL2Q5VZF2 373 aaKnown RBP5.66□□□□□ -1.5
VPS13A-211ENST00000484581 BTBD8Q5XKL5 378 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 ERAP2Q6P179 960 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 CCDC62Q6P9F0 684 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 BORAQ6PGQ7 559 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 TMED8Q6PL24 325 aaPredicted RBP5.66□□□□□ -1.5
VPS13A-211ENST00000484581 OVCH2Q7RTZ1 564 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 LGI4Q8N135 537 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 ENAHQ8N8S7 591 aaPredicted RBP5.66□□□□□ -1.5
VPS13A-211ENST00000484581 KYQ8NBH2 561 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 CHST13Q8NET6 341 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 AUTS2Q8WXX7 1259 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 SEC14L1Q92503 715 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 FERMT2Q96AC1 680 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 EAF2Q96CJ1 260 aaPredicted RBP5.66□□□□□ -1.5
VPS13A-211ENST00000484581 C1GALT1C1Q96EU7 318 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 MVB12AQ96EY5 273 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 TNIP3Q96KP6 325 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 RBM15Q96T37 977 aaKnown RBP eCLIP5.66□□□□□ -1.5
VPS13A-211ENST00000484581 SEMA4AQ9H3S1 761 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 PTPRHQ9HD43 1115 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 NLRC4Q9NPP4 1024 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 RIC8BQ9NVN3 520 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 MYOTQ9UBF9 498 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 ASB1Q9Y576 335 aa5.66□□□□□ -1.5
VPS13A-211ENST00000484581 CCDC189A1A4V9 331 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 H3BML4 177 aa5.65□□□□□ -1.5
VPS13A-211ENST00000484581 ELL2O00472 640 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms