RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 KIF20AO95235 890 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 PRNPP04156 253 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 GCFC2P16383 781 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 STX17P56962 302 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 ETF1P62495 437 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 FKBP1AP62942 108 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 ZNF252P-AS1Q0IIN9 211 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 TXNRD1Q16881 649 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 ZNF827Q17R98 1081 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 LETM2Q2VYF4 491 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 FKBP15Q5T1M5 1219 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 KRT79Q5XKE5 535 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 HHIPL2Q6UWX4 724 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 SYT10Q6XYQ8 523 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 CREBRFQ8IUR6 639 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 FOXP4Q8IVH2 680 aaPredicted RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 TXLNBQ8N3L3 684 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 ZNF397Q8NF99 534 aaPredicted RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 CUL5Q93034 780 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 CEP95Q96GE4 821 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 DHTKD1Q96HY7 919 aaPredicted RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 NUP88Q99567 741 aaPredicted RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 FEZ1Q99689 392 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 TSG101Q99816 390 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 NUP58Q9BVL2 599 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 CEP44Q9C0F1 390 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 THAP9Q9H5L6 903 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 USP40Q9NVE5 1235 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 TMOD2Q9NZR1 351 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 POLLQ9UGP5 575 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 LIMA1Q9UHB6 759 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 TTF2Q9UNY4 1162 aaKnown RBP6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 PPP2R2CQ9Y2T4 447 aa6.55□□□□□ -1.36
ATPAF1-204ENST00000474020 KCNJ18B7U540 433 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 H0YIN7 160 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 PES1O00541 588 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 PAX4O43316 350 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 GOLGA8HP0CJ92 632 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 RBM5P52756 815 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 RHBDL3P58872 404 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 ASIC1P78348 528 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 HDLBPQ00341 1268 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 DDR1Q08345 913 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 TBX2Q13207 712 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 CUL4BQ13620 913 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 KCNJ12Q14500 433 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 NR1I3Q14994 352 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 SEPT2Q15019 361 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 KARSQ15046 597 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 NPY5RQ15761 445 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 CALCRLQ16602 461 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 ARHGAP29Q52LW3 1261 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 EARS2Q5JPH6 523 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 CDKAL1Q5VV42 579 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 E4F1Q66K89 784 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 OGFOD3Q6PK18 319 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 CYP26C1Q6V0L0 522 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 USP49Q70CQ1 688 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 SV2BQ7L1I2 683 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 TMTC1Q8IUR5 882 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 SMYD4Q8IYR2 804 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 SLC44A5Q8NCS7 719 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 ANKRD7Q92527 254 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 UBXN4Q92575 508 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 DPF2Q92785 391 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 ZNF622Q969S3 477 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 GPR101Q96P66 508 aaPredicted RBP6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 NT5C3AQ9H0P0 336 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 HSD3B7Q9H2F3 369 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 BLZF1Q9H2G9 400 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 TMX1Q9H3N1 280 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 VAT1LQ9HCJ6 419 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 SAMSN1Q9NSI8 373 aaKnown RBP6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 CACNA2D2Q9NY47 1150 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 MTMR4Q9NYA4 1195 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 LRWD1Q9UFC0 647 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 DNAI1Q9UI46 699 aa6.54□□□□□ -1.36
ATPAF1-204ENST00000474020 TAF1P21675 1872 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 KDM3AQ9Y4C1 1321 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 SNED1Q8TER0 1413 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 A0A087X0B3 334 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 PVALEFA0A1B0GWK0 134 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 USP27XA6NNY8 438 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 TMEM232C9JQI7 657 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 F8W031 263 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 SMIM22K7EJ46 135 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 ENC1O14682 589 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 MFAP3LO75121 409 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 URI1O94763 535 aaPredicted RBP6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 RHOBTB3O94955 611 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 SRGNP10124 158 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 PDHBP11177 359 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 BMP6P22004 513 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 TNNI2P48788 182 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 COPB1P53618 953 aaKnown RBP6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 GNG11P61952 73 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 UBXN1Q04323 297 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 TTLL4Q14679 1199 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 KRT31Q15323 416 aa6.53□□□□□ -1.36
ATPAF1-204ENST00000474020 HSP90AA4PQ58FG1 418 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms