RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 ZNF131P52739 623 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 KCNA1Q09470 495 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 MAPK7Q13164 816 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 LAMB3Q13751 1172 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 PRELID2Q8N945 189 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 PIGSQ96S52 555 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 DDX50Q9BQ39 737 aaKnown RBP8.56□□□□□ -1.04
TPM3-215ENST00000469717 RNPEPL1Q9HAU8 725 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 MAGEF1Q9HAY2 307 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 RXFP1Q9HBX9 757 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 PCMTD2Q9NV79 361 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 LRRD1A4D1F6 860 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 SP100P23497 879 aaPredicted RBP8.56□□□□□ -1.04
TPM3-215ENST00000469717 FOXN2P32314 431 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 TRIP13Q15645 432 aaPredicted RBP8.56□□□□□ -1.04
TPM3-215ENST00000469717 COBLL1Q53SF7 1204 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 RFWD3Q6PCD5 774 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 OLIG1Q8TAK6 271 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 MXD3Q9BW11 206 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 KIAA1683Q9H0B3 1180 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 THAP2Q9H0W7 228 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 ARMCX3Q9UH62 379 aaPredicted RBP8.56□□□□□ -1.04
TPM3-215ENST00000469717 ARL2BPQ9Y2Y0 163 aa8.56□□□□□ -1.04
TPM3-215ENST00000469717 CLIC2O15247 247 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 UNC5CO95185 931 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 CHKAP35790 457 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 PTGIRP43119 386 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 CTTNQ14247 550 aaKnown RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 SETDB1Q15047 1291 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 DIXDC1Q155Q3 683 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 UBE2SQ16763 222 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 CCNJLQ8IV13 435 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 CCDC134Q9H6E4 229 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 SUDS3Q9H7L9 328 aaPredicted RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 NUMBLQ9Y6R0 609 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 ABCB11O95342 1321 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 DCAF8L1A6NGE4 600 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 LAD1O00515 517 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 ATMINO43313 823 aaPredicted RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 GJB6O95452 261 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 AFPP02771 609 aaKnown RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 FERP16591 822 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 CALB2P22676 271 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 PPP1R2P41236 205 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 VPS41P49754 854 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 C6orf118Q5T5N4 469 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 C3orf67Q6ZVT6 689 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 COL23A1Q86Y22 540 aaPredicted RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 SRRM1Q8IYB3 904 aaKnown RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 B4GALNT2Q8NHY0 566 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 EZH1Q92800 747 aaPredicted RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 MTMR9Q96QG7 549 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 ZC3H12CQ9C0D7 883 aaKnown RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 KCTD10Q9H3F6 313 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 CDC42EP4Q9H3Q1 356 aaKnown RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 PRKAG3Q9UGI9 489 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 SAP30BPQ9UHR5 308 aaKnown RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 POTECB2RU33 542 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 LRRN2O75325 713 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 FLOT1O75955 427 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 RNF8O76064 485 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 CHRNB2P17787 502 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 TNNI2P48788 182 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 PEX5P50542 639 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 DNAJC3Q13217 504 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 GRM4Q14833 912 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 SLMAPQ14BN4 828 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 VSIG1Q86XK7 387 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 NSUN4Q96CB9 384 aaKnown RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 BTBD6Q96KE9 485 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 IFT74Q96LB3 600 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 GPR101Q96P66 508 aaPredicted RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 TMEM47Q9BQJ4 181 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 UBE2OQ9C0C9 1292 aaKnown RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 DENND2DQ9H6A0 471 aaPredicted RBP8.55□□□□□ -1.04
TPM3-215ENST00000469717 RIC8AQ9NPQ8 531 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 SH3GLB2Q9NR46 395 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 KCNQ5Q9NR82 932 aa8.55□□□□□ -1.04
TPM3-215ENST00000469717 AKAP3O75969 853 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 LUC7L3O95232 432 aaKnown RBP8.54□□□□□ -1.04
TPM3-215ENST00000469717 BRAFP15056 766 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 STAT3P40763 770 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 ROR2Q01974 943 aaKnown RBP8.54□□□□□ -1.04
TPM3-215ENST00000469717 TRAF1Q13077 416 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 SLC5A9Q2M3M2 681 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 RFX8Q6ZV50 586 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 PIGOQ8TEQ8 1089 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 STK32AQ8WU08 396 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 CCDC97Q96F63 343 aaPredicted RBP8.54□□□□□ -1.04
TPM3-215ENST00000469717 SIX2Q9NPC8 291 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 EMILIN3Q9NT22 766 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 LMCD1Q9NZU5 365 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 CHKBQ9Y259 395 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 LRRC42Q9Y546 428 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 UBR2Q8IWV8 1755 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 FRMPD2Q68DX3 1309 aaPredicted RBP8.54□□□□□ -1.04
TPM3-215ENST00000469717 MEIS1O00470 390 aa8.54□□□□□ -1.04
TPM3-215ENST00000469717 SPAG7O75391 227 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms