RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TTLL3Q9Y4R7 772 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 AFG3L2Q9Y4W6 797 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 SNCAIPQ9Y6H5 919 aa15.21■□□□□ 0.03
SMARCA4-204ENST00000444061 MED24O75448 989 aa15.21■□□□□ 0.02
SMARCA4-204ENST00000444061 ACOT2P49753 483 aa15.21■□□□□ 0.02
SMARCA4-204ENST00000444061 FLT3LGP49771 235 aa15.21■□□□□ 0.02
SMARCA4-204ENST00000444061 ZBED6P86452 979 aa15.21■□□□□ 0.02
SMARCA4-204ENST00000444061 PDZD4Q76G19 769 aaPredicted RBP15.21■□□□□ 0.02
SMARCA4-204ENST00000444061 TTC39CQ8N584 583 aa15.21■□□□□ 0.02
SMARCA4-204ENST00000444061 CCDC77Q9BR77 488 aa15.21■□□□□ 0.02
SMARCA4-204ENST00000444061 TSKSQ9UJT2 592 aa15.21■□□□□ 0.02
SMARCA4-204ENST00000444061 GPR182O15218 404 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 VSIG10LQ86VR7 867 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 C4orf19Q8IY42 314 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 GIMAP7Q8NHV1 300 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 HSPBP1Q9NZL4 362 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 BCCIPQ9P287 314 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 DNAJC12Q9UKB3 198 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 HOXC6P09630 235 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 ZNF710Q8N1W2 664 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 KIAA1524Q8TCG1 905 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 IFT122Q9HBG6 1241 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 SLC12A6Q9UHW9 1150 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 ATP1A3P13637 1013 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 SCP2P22307 547 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 TBXAS1P24557 533 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 SKIV2LQ15477 1246 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 MAATS1Q7Z4T9 603 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 MAIP1Q8WWC4 291 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 MTRF1LQ9UGC7 380 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 RGPD1P0DJD0 1748 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 TRIM49P0CI25 452 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 TRIM49CP0CI26 452 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 INSRRP14616 1297 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 ZRSR2Q15696 482 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 CCDC14Q49A88 953 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 RINT1Q6NUQ1 792 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 LBX2Q6XYB7 198 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 ELMOD1Q8N336 334 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 TARS2Q9BW92 718 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 SETD4Q9NVD3 440 aa15.2■□□□□ 0.02
SMARCA4-204ENST00000444061 FAM86B1E9PN63 330 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 FAM86B2P0C5J1 330 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 STAG3L1P0CL83 205 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 DNAJC24Q6P3W2 148 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 DLK2Q6UY11 383 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 MICALCLQ6ZW33 695 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 PSMB7Q99436 277 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 GMLQ99445 158 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 DESI2Q9BSY9 194 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 PQBP1O60828 265 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 CPB1P15086 417 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 PRPF31Q8WWY3 499 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 HVCN1Q96D96 273 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 ROBO3Q96MS0 1386 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 TADA2AO75478 443 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 RHOBTB3O94955 611 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 RAG1P15918 1043 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 GTF2F1P35269 517 aaKnown RBP eCLIP15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 GRIN1Q05586 938 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 RBL2Q08999 1139 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 KIZQ2M2Z5 673 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 TXNDC16Q9P2K2 825 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 A6NJR5 290 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 SKIP12755 728 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 PTPN21Q16825 1174 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 TMEM270Q6UE05 265 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 MAP7D3Q8IWC1 876 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 TRIM58Q8NG06 486 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 SLC38A7Q9NVC3 462 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 OGFRQ9NZT2 677 aa15.19■□□□□ 0.02
SMARCA4-204ENST00000444061 IVLP07476 585 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 TOB1P50616 345 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 GRB10Q13322 594 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 CLUL1Q15846 466 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 ZC2HC1CQ53FD0 456 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 NOL9Q5SY16 702 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 CFAP58Q5T655 872 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 EMSYQ7Z589 1322 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 FBXL13Q8NEE6 735 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 SEPT8Q92599 483 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 HAUS4Q9H6D7 363 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 MYBP10242 640 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 PRKAR2AP13861 404 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 ATP2A2P16615 1042 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 TMEM132DQ14C87 1099 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 LMBRD2Q68DH5 695 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 AGAP1Q9UPQ3 857 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 PCDHB7Q9Y5E2 793 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 LGALS16A8MUM7 142 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 A8MXQ7 604 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 DPYDQ12882 1025 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 STK4Q13043 487 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 MFSD10Q14728 455 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 PRAMEF19Q5SWL8 479 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 ZNF384Q8TF68 577 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 PIDD1Q9HB75 910 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 MRPL47Q9HD33 250 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 FAM169AQ9Y6X4 670 aa15.18■□□□□ 0.02
SMARCA4-204ENST00000444061 TUBB4BP68371 445 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms