RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 HIP1RO75146 1068 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 ERLIN2O94905 339 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 SKIP12755 728 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 ANP32AP39687 249 aaKnown RBP13.07□□□□□ -0.32
HSPG2-206ENST00000439717 MBTD1Q05BQ5 628 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 PPP2R2DQ66LE6 453 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 DEPTORQ8TB45 409 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 BSNDQ8WZ55 320 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 LARP4BQ92615 738 aaKnown RBP13.07□□□□□ -0.32
HSPG2-206ENST00000439717 ZNF689Q96CS4 500 aaPredicted RBP13.07□□□□□ -0.32
HSPG2-206ENST00000439717 PRIMPOLQ96LW4 560 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 TTYH1Q9H313 450 aaPredicted RBP13.07□□□□□ -0.32
HSPG2-206ENST00000439717 PRMT7Q9NVM4 692 aaPredicted RBP13.07□□□□□ -0.32
HSPG2-206ENST00000439717 TMEM161AQ9NX61 479 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 LRFN2Q9ULH4 789 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 PIN4Q9Y237 131 aaKnown RBP13.07□□□□□ -0.32
HSPG2-206ENST00000439717 COL4A6Q14031 1691 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 PHLPP2Q6ZVD8 1323 aa13.07□□□□□ -0.32
HSPG2-206ENST00000439717 A0A0U1RQF3 1178 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 DGKIO75912 1065 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 EOMESO95936 686 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 HOXA11P31270 313 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-206ENST00000439717 ME1P48163 572 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 RAB27AP51159 221 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 EFNA5P52803 228 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 MAPK7Q13164 816 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 DMP1Q13316 513 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-206ENST00000439717 MCM6Q14566 821 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 FAM187BQ17R55 369 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 ARSHQ5FYA8 562 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 AXDND1Q5T1B0 1012 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-206ENST00000439717 TWF2Q6IBS0 349 aaKnown RBP13.06□□□□□ -0.32
HSPG2-206ENST00000439717 PPP4R3CPQ6ZMV5 832 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 Q7L0L9 218 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 GPBP1Q86WP2 473 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 ECHDC2Q86YB7 292 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 DAW1Q8N136 415 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 LRRC15Q8TF66 581 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 CCDC51Q96ER9 411 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 SCAND2PQ9GZW5 306 aaPredicted RBP13.06□□□□□ -0.32
HSPG2-206ENST00000439717 FZD8Q9H461 694 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 RC3H2Q9HBD1 1191 aaKnown RBP13.06□□□□□ -0.32
HSPG2-206ENST00000439717 ODF2LQ9ULJ1 636 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 PCDHA7Q9UN72 937 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 TTC3P53804 2025 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 GBF1Q92538 1859 aa13.06□□□□□ -0.32
HSPG2-206ENST00000439717 LCHNA4D1U4 455 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 LINC01553A4QN01 128 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 HOXA2O43364 376 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 TSPAN1O60635 241 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 ZNF623O75123 536 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 PLS3P13797 630 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 NCLP19338 710 aaKnown RBP13.05□□□□□ -0.32
HSPG2-206ENST00000439717 STAT6P42226 847 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 NPTX2P47972 431 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 PEX3P56589 373 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 TAP1Q03518 808 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 MAPK6Q16659 721 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 AMHR2Q16671 573 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 NOTUMQ6P988 496 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 SHC4Q6S5L8 630 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 SV2BQ7L1I2 683 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 CMTR2Q8IYT2 770 aaKnown RBP13.05□□□□□ -0.32
HSPG2-206ENST00000439717 LEO1Q8WVC0 666 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-206ENST00000439717 SPIRE2Q8WWL2 714 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 RSPH1Q8WYR4 309 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 SPATA32Q96LK8 384 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 SAMD11Q96NU1 681 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 NTPCRQ9BSD7 190 aaKnown RBP13.05□□□□□ -0.32
HSPG2-206ENST00000439717 POLD4Q9HCU8 107 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 MTMR10Q9NXD2 777 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 FAM13BQ9NYF5 915 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-206ENST00000439717 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
HSPG2-206ENST00000439717 ADGRA3Q8IWK6 1321 aa13.05□□□□□ -0.32
HSPG2-206ENST00000439717 SZT2Q5T011 3432 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 CCDC169A6NNP5 214 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 KRT18P05783 430 aaKnown RBP13.04□□□□□ -0.32
HSPG2-206ENST00000439717 SMTNP53814 917 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 BTG3Q14201 252 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-206ENST00000439717 DHX8Q14562 1220 aaKnown RBP13.04□□□□□ -0.32
HSPG2-206ENST00000439717 NAALADL2Q58DX5 795 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 ZNF598Q86UK7 904 aaKnown RBP13.04□□□□□ -0.32
HSPG2-206ENST00000439717 FIBCD1Q8N539 461 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 CNNM3Q8NE01 707 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 PGBD4Q96DM1 585 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 FAM161BQ96MY7 647 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 TGS1Q96RS0 853 aaKnown RBP13.04□□□□□ -0.32
HSPG2-206ENST00000439717 PYM1Q9BRP8 204 aaKnown RBP13.04□□□□□ -0.32
HSPG2-206ENST00000439717 CCDC113Q9H0I3 377 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 CUEDC2Q9H467 287 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 TMEM134Q9H6X4 195 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 KMT5AQ9NQR1 393 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 FAM105AQ9NUU6 356 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 LARSQ9P2J5 1176 aaKnown RBP13.04□□□□□ -0.32
HSPG2-206ENST00000439717 RWDD3Q9Y3V2 267 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 CNTNAP2Q9UHC6 1331 aa13.04□□□□□ -0.32
HSPG2-206ENST00000439717 A0A087X0B3 334 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 NPHP3-ACAD11A0A0J9YXS1 232 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 A0A1B0GUA9 196 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms