RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 TMX3Q96JJ7 454 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 NAP1L4Q99733 375 aaKnown RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 LXNQ9BS40 222 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 COL25A1Q9BXS0 654 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 FTHL17Q9BXU8 183 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 NIFKQ9BYG3 293 aaKnown RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 UPF2Q9HAU5 1272 aaKnown RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 RC3H2Q9HBD1 1191 aaKnown RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 CYP26B1Q9NR63 512 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 SPTBN5Q9NRC6 3674 aaKnown RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 MRPL42Q9Y6G3 142 aaKnown RBP6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 ADGRA3Q8IWK6 1321 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 KIAA1671Q9BY89 1806 aa6.46□□□□□ -1.38
HMGB1P20-201ENST00000402555 A0A087WZ62 844 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 IGKV6-21A0A0C4DH24 114 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 DENND3A2RUS2 1198 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 C9IYK1 514 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 GPR182O15218 404 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 MAFO75444 373 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 DGAT1O75907 488 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 DGKIO75912 1065 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 SLITRK3O94933 977 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 DARSP14868 501 aaKnown RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 POU3F3P20264 500 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 EIF4BP23588 611 aaKnown RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 YWHABP31946 246 aaKnown RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 SARSP49591 514 aaKnown RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 GPM6BQ13491 265 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 GNL2Q13823 731 aaKnown RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 DSC3Q14574 896 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 XKR9Q5GH70 373 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 FAM102BQ5T8I3 360 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 BRICD5Q6PL45 260 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 RHPN2Q8IUC4 686 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 SLFN12Q8IYM2 578 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 RNF169Q8NCN4 708 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 TMEM143Q96AN5 459 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 ZNF689Q96CS4 500 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 CEP170P1Q96L14 293 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 NLRP4Q96MN2 994 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 TBC1D32Q96NH3 1257 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 MTMR9Q96QG7 549 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 EIF2AK1Q9BQI3 630 aaKnown RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 FDXACB1Q9BRP7 624 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 FOXP1Q9H334 677 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 TTC12Q9H892 705 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 RGS18Q9NS28 235 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 SUCLA2Q9P2R7 463 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 THEGQ9P2T0 379 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 LRFN2Q9ULH4 789 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 PCDHA12Q9UN75 941 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 TCF20Q9UGU0 1960 aaKnown RBP6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 ARID2Q68CP9 1835 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 RALGAPA2Q2PPJ7 1873 aa6.45□□□□□ -1.38
HMGB1P20-201ENST00000402555 ATG2AQ2TAZ0 1938 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 TBKBP1A7MCY6 615 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 H3BNC9 293 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 GRM6O15303 877 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 DKC1O60832 514 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 MED24O75448 989 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 OR52Z1P0C646 297 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 STAG3L1P0CL83 205 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 SRGAP2CP0DJJ0 459 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 FGFR1P11362 822 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 CD46P15529 392 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 GJB2P29033 226 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 BMPR1AP36894 532 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 RPIAP49247 311 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 DNM2P50570 870 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 TOB1P50616 345 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 KCNQ1P51787 676 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 POLGP54098 1239 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 EMC2Q15006 297 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 LONRF3Q496Y0 759 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 TTC38Q5R3I4 469 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 ODR4Q5SWX8 454 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 MCTP1Q6DN14 999 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 SLC24A5Q71RS6 500 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 NOSTRINQ8IVI9 506 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 C4orf19Q8IY42 314 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 CMTR2Q8IYT2 770 aaKnown RBP6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 PIGOQ8TEQ8 1089 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 PRPF31Q8WWY3 499 aaKnown RBP6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 SAMD11Q96NU1 681 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 HSD17B14Q9BPX1 270 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 GCOM2Q9BZD3 368 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 DHX33Q9H6R0 707 aaKnown RBP6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 ZSWIM4Q9H7M6 989 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 MINDY3Q9H8M7 445 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 ALG13Q9NP73 1137 aaKnown RBP6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 XPNPEP1Q9NQW7 623 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 RNF19AQ9NV58 838 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 FCF1Q9Y324 198 aaKnown RBP6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 PCDHB7Q9Y5E2 793 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 COL4A3BPQ9Y5P4 624 aa6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 FNDC1Q4ZHG4 1894 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P20-201ENST00000402555 XIRP2A4UGR9 3374 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 TNFRSF10AO00220 468 aa6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 TULP1O00294 542 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P20-201ENST00000402555 USO1O60763 962 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 682.7 ms