RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 AZI2Q9H6S1 392 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 APEX2Q9UBZ4 518 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 GRIN2DO15399 1336 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 CAND2O75155 1236 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 SHBGP04278 402 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 GUCY2CP25092 1073 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 HOXA10P31260 410 aaPredicted RBP13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 ITIH3Q06033 890 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 BIRC3Q13489 604 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 ARHGEF19Q8IW93 802 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 RAB17Q9H0T7 212 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 TOPORSQ9NS56 1045 aaPredicted RBP13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 RASAL2Q9UJF2 1139 aa13.68□□□□□ -0.22
PPP4R1-202ENST00000400555 RBAK-RBAKDNI3L0D1 243 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 SGPL1O95470 568 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 MXI1P50539 228 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 PRKG1Q13976 671 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 ZKSCAN8Q15776 578 aaPredicted RBP13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 C10orf76Q5T2E6 689 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 ZNF720Q7Z2F6 126 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 PASD1Q8IV76 773 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 CHURC1Q8WUH1 139 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 DHX38Q92620 1227 aaKnown RBP13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 ZDHHC15Q96MV8 337 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 JPH2Q9BR39 696 aaPredicted RBP13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 EHMT1Q9H9B1 1298 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 FOXO6A8MYZ6 492 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 VAMP7P51809 220 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 E2F5Q15329 346 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 KRT27Q7Z3Y8 459 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 PNMA8AQ86V59 439 aaPredicted RBP13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 PIK3R5Q8WYR1 880 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 ALG3Q92685 438 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 KAT2BQ92831 832 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 AGPAT1Q99943 283 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 SH3GL2Q99962 352 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 ZNF341Q9BYN7 854 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 GMNCA6NCL1 334 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 RPS6KA5O75582 802 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 COMTP21964 271 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 BFSP1Q12934 665 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 SLC29A2Q14542 456 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 UAP1Q16222 522 aaPredicted RBP13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 MRPL11Q9Y3B7 192 aaKnown RBP13.67□□□□□ -0.22
PPP4R1-202ENST00000400555 MEFVO15553 781 aaPredicted RBP13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 PPP2R2AP63151 447 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 CALCOCO2Q13137 446 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 ICE2Q659A1 982 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 CACNA2D3Q8IZS8 1091 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 DNAJC5Q9H3Z4 198 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 TMBIM4Q9HC24 238 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 SIX2Q9NPC8 291 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 VAV3Q9UKW4 847 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 CCDC188H7C350 402 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 NFIBO00712 420 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 MTM1Q13496 603 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 FAM133BQ5BKY9 247 aaKnown RBP13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 ZNF277Q9NRM2 450 aaPredicted RBP13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 MTRF1LQ9UGC7 380 aaKnown RBP13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 MYO3BQ8WXR4 1341 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 PPP3CAQ08209 521 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 HYIQ5T013 277 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 KDM7AQ6ZMT4 941 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 C1orf186Q6ZWK4 172 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 CBWD2Q8IUF1 395 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 LRRC57Q8N9N7 239 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 ATG4AQ8WYN0 398 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 POMGNT1Q8WZA1 660 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 CYFIP2Q96F07 1278 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 ELAC2Q9BQ52 826 aaKnown RBP13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 CNOT8Q9UFF9 292 aaKnown RBP13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 CCDC88AQ3V6T2 1871 aa13.66□□□□□ -0.22
PPP4R1-202ENST00000400555 MTMR3Q13615 1198 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 QPCTQ16769 361 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 KAZNQ674X7 775 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 LLGL2Q6P1M3 1020 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 CCDC137Q6PK04 289 aaKnown RBP13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 GSTA5Q7RTV2 222 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 SLC47A2Q86VL8 602 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 IL31RAQ8NI17 732 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 GDAP1Q8TB36 358 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 SEMA4AQ9H3S1 761 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 FAM114A2Q9NRY5 505 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 TCRBV7S2A1N4TA0A589 114 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 CLDN3O15551 220 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 HNRNPH1P31943 449 aaKnown RBP13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 IFI35P80217 286 aaPredicted RBP13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 Q4G0T1 1027 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 HAUS6Q7Z4H7 955 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 JAMLQ86YT9 394 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 SCFD2Q8WU76 684 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 NUP85Q9BW27 656 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 KCNH7Q9NS40 1196 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 COG5Q9UP83 839 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 ARAP2Q8WZ64 1704 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 OPLAHO14841 1288 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 PMS2P54278 862 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 DACT2Q5SW24 774 aa13.65□□□□□ -0.22
PPP4R1-202ENST00000400555 STRIP1Q5VSL9 837 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms