RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 RTKN2Q8IZC4 609 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 TTC1Q99614 292 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 NUP85Q9BW27 656 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 CRYMQ14894 314 aa18.34■□□□□ 0.53
SIN3A-203ENST00000394949 RBM12Q9NTZ6 932 aaKnown RBP18.34■□□□□ 0.53
SIN3A-203ENST00000394949 CFAP69A5D8W1 941 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 RAD17O75943 681 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 FTLP02792 175 aaPredicted RBP18.33■□□□□ 0.53
SIN3A-203ENST00000394949 SOX5P35711 763 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 RANBP1P43487 201 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 INPP1P49441 399 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 ACAD11Q709F0 780 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 CCNYQ8ND76 341 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 TRIM9Q9C026 710 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 KIAA1586Q9HCI6 787 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 SRP68Q9UHB9 627 aaKnown RBP18.33■□□□□ 0.53
SIN3A-203ENST00000394949 PHF20L1A8MW92 1017 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 CALB1P05937 261 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 KCNQ4P56696 695 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 CUL3Q13618 768 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 SLFN12LQ6IEE8 588 aa18.33■□□□□ 0.53
SIN3A-203ENST00000394949 TARBP1Q13395 1621 aaKnown RBP18.33■□□□□ 0.52
SIN3A-203ENST00000394949 TMEM179Q6ZVK1 233 aa18.33■□□□□ 0.52
SIN3A-203ENST00000394949 KRT14P02533 472 aa18.33■□□□□ 0.52
SIN3A-203ENST00000394949 TMEM35BQ8NCS4 154 aa18.33■□□□□ 0.52
SIN3A-203ENST00000394949 TAF1BQ53T94 588 aaPredicted RBP18.32■□□□□ 0.52
SIN3A-203ENST00000394949 BRINP3Q76B58 766 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 INTS2Q9H0H0 1204 aaKnown RBP18.32■□□□□ 0.52
SIN3A-203ENST00000394949 AP5M1Q9H0R1 490 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 ZBTB24O43167 697 aaPredicted RBP18.32■□□□□ 0.52
SIN3A-203ENST00000394949 ASNSP08243 561 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 PSMA2P25787 234 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 THOC5Q13769 683 aaKnown RBP18.32■□□□□ 0.52
SIN3A-203ENST00000394949 RARS2Q5T160 578 aaKnown RBP18.32■□□□□ 0.52
SIN3A-203ENST00000394949 CIAPIN1Q6FI81 312 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 RHOT1Q8IXI2 618 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 MCUQ8NE86 351 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 HEMGNQ9BXL5 484 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 FOXP3Q9BZS1 431 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 NBPF3Q9H094 633 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 SMYD3Q9H7B4 428 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 PHF2O75151 1096 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 LDHAP00338 332 aaKnown RBP18.32■□□□□ 0.52
SIN3A-203ENST00000394949 MASTLQ96GX5 879 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 CACYBPQ9HB71 228 aaKnown RBP18.32■□□□□ 0.52
SIN3A-203ENST00000394949 CYP26B1Q9NR63 512 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 PNPLA7Q6ZV29 1317 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 OATP04181 439 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 CCND2P30279 289 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 PGM1P36871 562 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 NCAPHQ15003 741 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 IZUMO3Q5VZ72 239 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 C16orf87Q6PH81 154 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 SLC38A10Q9HBR0 1119 aa18.32■□□□□ 0.52
SIN3A-203ENST00000394949 CDHR2Q9BYE9 1310 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 ESYT2A0FGR8 921 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 WDR64B1ANS9 1081 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 S100BP04271 92 aaPredicted RBP18.31■□□□□ 0.52
SIN3A-203ENST00000394949 FAM182BQ5T319 152 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 SEPT12Q8IYM1 358 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 PNKPQ96T60 521 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 TMEM47Q9BQJ4 181 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 NARFQ9UHQ1 456 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 DNAL1Q4LDG9 190 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 ENOSF1Q7L5Y1 443 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 GLYCTKQ8IVS8 523 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 ATL2Q8NHH9 583 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 C7orf25Q9BPX7 421 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 FAM129AQ9BZQ8 928 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 STRIP2Q9ULQ0 834 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 E9PMD0 336 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 ITIH2P19823 946 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 EPHB1P54762 984 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 ITKQ08881 620 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 TTLL6Q8N841 843 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 GIPC2Q8TF65 315 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 TRAF3IP3Q9Y228 551 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 PDS5AQ29RF7 1337 aaKnown RBP18.31■□□□□ 0.52
SIN3A-203ENST00000394949 ZNF609O15014 1411 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 MMP10P09238 476 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 CTTNQ14247 550 aaKnown RBP18.31■□□□□ 0.52
SIN3A-203ENST00000394949 PDIA5Q14554 519 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 KLC3Q6P597 504 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 CYB5D1Q6P9G0 228 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 TRAPPC11Q7Z392 1133 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 ALKBH8Q96BT7 664 aaKnown RBP18.31■□□□□ 0.52
SIN3A-203ENST00000394949 MS4A14Q96JA4 679 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 AKT3Q9Y243 479 aa18.31■□□□□ 0.52
SIN3A-203ENST00000394949 GSG1L2A8MUP6 293 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 ZBTB5O15062 677 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 NVLO15381 856 aaKnown RBP18.3■□□□□ 0.52
SIN3A-203ENST00000394949 ABL1P00519 1130 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 FCER1AP12319 257 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 RABL6Q3YEC7 729 aaPredicted RBP18.3■□□□□ 0.52
SIN3A-203ENST00000394949 OR6B2Q6IFH4 312 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 DNAJC9Q8WXX5 260 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 PHF20Q9BVI0 1012 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 AGPAT5Q9NUQ2 364 aa18.3■□□□□ 0.52
SIN3A-203ENST00000394949 G3BP2Q9UN86 482 aaKnown RBP18.3■□□□□ 0.52
SIN3A-203ENST00000394949 PDXKO00764 312 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms