RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 GTPBP10A4D1E9 387 aaKnown RBP13.18□□□□□ -0.3
HMGCL-202ENST00000374487 DHX15O43143 795 aaKnown RBP13.18□□□□□ -0.3
HMGCL-202ENST00000374487 CXCR5P32302 372 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 PAFAH1B1P43034 410 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 QARSP47897 775 aaKnown RBP13.18□□□□□ -0.3
HMGCL-202ENST00000374487 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
HMGCL-202ENST00000374487 ITGB3BPQ13352 177 aaPredicted RBP13.18□□□□□ -0.3
HMGCL-202ENST00000374487 C10orf76Q5T2E6 689 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 UTP14CQ5TAP6 766 aaKnown RBP13.18□□□□□ -0.3
HMGCL-202ENST00000374487 NFRKBQ6P4R8 1299 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 ZNF771Q7L3S4 317 aaPredicted RBP13.18□□□□□ -0.3
HMGCL-202ENST00000374487 VPS36Q86VN1 386 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 SAMD3Q8N6K7 520 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 COG1Q8WTW3 980 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 BORCS6Q96GS4 357 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 ABHD8Q96I13 439 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 RMDN3Q96TC7 470 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 PTCH2Q9Y6C5 1203 aa13.18□□□□□ -0.3
HMGCL-202ENST00000374487 TARSL2A2RTX5 802 aaKnown RBP13.17□□□□□ -0.3
HMGCL-202ENST00000374487 K7ENM7 598 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 MAP2K7O14733 419 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 NCK2O43639 380 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 EXOC3O60645 756 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 EIF3JO75822 258 aaKnown RBP13.17□□□□□ -0.3
HMGCL-202ENST00000374487 GHRHRQ02643 423 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 PRKCZQ05513 592 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 C2orf54Q08AI8 447 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 MAP9Q49MG5 647 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 DPY19L2P1Q6NXN4 242 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 NSMFQ6X4W1 530 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 RNF207Q6ZRF8 634 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 FBXL5Q9UKA1 691 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 PALMO75781 387 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 KLRC1P26715 233 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 OAS2P29728 719 aaKnown RBP13.17□□□□□ -0.3
HMGCL-202ENST00000374487 PGM5Q15124 567 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 FAM110CQ1W6H9 321 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 ARHGEF16Q5VV41 709 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 TRMT1LQ7Z2T5 733 aaKnown RBP13.17□□□□□ -0.3
HMGCL-202ENST00000374487 ZNF571Q7Z3V5 609 aaPredicted RBP13.17□□□□□ -0.3
HMGCL-202ENST00000374487 RDH13Q8NBN7 331 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 TLR10Q9BXR5 811 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 ZMYND15Q9H091 742 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 SUGCTQ9HAC7 445 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 DBR1Q9UK59 544 aaKnown RBP13.17□□□□□ -0.3
HMGCL-202ENST00000374487 PTPN22Q9Y2R2 807 aa13.17□□□□□ -0.3
HMGCL-202ENST00000374487 VWA5AO00534 786 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 FDX1P10109 184 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 YWHABP31946 246 aaKnown RBP13.16□□□□□ -0.3
HMGCL-202ENST00000374487 DSG3P32926 999 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 MATR3P43243 847 aaKnown RBP eCLIP13.16□□□□□ -0.32e-8■■■□□ 16.9
HMGCL-202ENST00000374487 FMO5P49326 533 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 ERVK-9P63128 1117 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 MAPK7Q13164 816 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 DAW1Q8N136 415 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 SPATA4Q8NEY3 305 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 GPRC5AQ8NFJ5 357 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 SH3TC2Q8TF17 1288 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 PACSIN1Q9BY11 444 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 TMEM206Q9H813 350 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 RLFQ13129 1914 aa13.16□□□□□ -0.3
HMGCL-202ENST00000374487 STAT1P42224 750 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 GCLCP48506 637 aaPredicted RBP13.15□□□□□ -0.3
HMGCL-202ENST00000374487 RARRES1P49788 294 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 ALCAMQ13740 583 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 CASP8Q14790 479 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 PPP2R5AQ15172 486 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 GJB7Q6PEY0 223 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 UBXN6Q9BZV1 441 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 SIX2Q9NPC8 291 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 DMAC2Q9NW81 257 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 MORF4L1Q9UBU8 362 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 CCDC85CA6NKD9 419 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 TNPO2O14787 897 aaKnown RBP13.15□□□□□ -0.3
HMGCL-202ENST00000374487 ZMYND10O75800 440 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 FTCDO95954 541 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 KRT13P13646 458 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 FERP16591 822 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 PRKCIP41743 596 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 DNA2P51530 1060 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 ITIH3Q06033 890 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 KIF22Q14807 665 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 TMEM132BQ14DG7 1078 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 CFAP221Q4G0U5 840 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 WDR78Q5VTH9 848 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 ALKBH5Q6P6C2 394 aaKnown RBP13.15□□□□□ -0.3
HMGCL-202ENST00000374487 LBX2Q6XYB7 198 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 PDCD2LQ9BRP1 358 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 ACBD3Q9H3P7 528 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 PXMP2Q9NR77 195 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 NAGPAQ9UK23 515 aa13.15□□□□□ -0.3
HMGCL-202ENST00000374487 WDR64B1ANS9 1081 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 GFPT2O94808 682 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 TRIM49P0CI25 452 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 TRIM49CP0CI26 452 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 PLS3P13797 630 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 ANXA13P27216 316 aa13.14□□□□□ -0.31
HMGCL-202ENST00000374487 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
HMGCL-202ENST00000374487 NOP2P46087 812 aaKnown RBP13.14□□□□□ -0.31
HMGCL-202ENST00000374487 FLT3LGP49771 235 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms