RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 NLRX1Q86UT6 975 aa19.6■□□□□ 0.73
CD40-201ENST00000372276 ISCUQ9H1K1 167 aa19.6■□□□□ 0.73
CD40-201ENST00000372276 TMCO5BA8MYB1 307 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 H0YCG3 227 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 NFIBO00712 420 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 GYS2P54840 703 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 COG2Q14746 738 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 PGM5Q15124 567 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 CBWD6Q4V339 395 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 CBWD3Q5JTY5 395 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 CBWD5Q5RIA9 395 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 CFAP58Q5T655 872 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 HAUS6Q7Z4H7 955 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 NT5DC3Q86UY8 548 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 LRRC45Q96CN5 670 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 GPRASP2Q96D09 838 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 GLIS2Q9BZE0 524 aaPredicted RBP19.59■□□□□ 0.73
CD40-201ENST00000372276 TAF1DQ9H5J8 278 aaPredicted RBP19.59■□□□□ 0.73
CD40-201ENST00000372276 COL20A1Q9P218 1284 aa19.59■□□□□ 0.73
CD40-201ENST00000372276 PHACTR2O75167 634 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 GLI1P08151 1106 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 HSPA6P17066 643 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 GTF2H1P32780 548 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 MRPS9P82933 396 aaKnown RBP19.58■□□□□ 0.73
CD40-201ENST00000372276 ITGB3BPQ13352 177 aaPredicted RBP19.58■□□□□ 0.73
CD40-201ENST00000372276 NBPF9Q3BBW0 867 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 SAMD1Q6SPF0 538 aaPredicted RBP19.58■□□□□ 0.73
CD40-201ENST00000372276 RNF207Q6ZRF8 634 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 LMO3Q8TAP4 145 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 LNX1Q8TBB1 728 aaPredicted RBP19.58■□□□□ 0.73
CD40-201ENST00000372276 KIFAP3Q92845 792 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 CDHR1Q96JP9 859 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 AGPAT1Q99943 283 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 CARD9Q9H257 536 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 POLD4Q9HCU8 107 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 EHD2Q9NZN4 543 aa19.58■□□□□ 0.73
CD40-201ENST00000372276 AJAP1Q9UKB5 411 aaPredicted RBP19.58■□□□□ 0.73
CD40-201ENST00000372276 COL4A5P29400 1685 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 MIF4GDA9UHW6 222 aaKnown RBP19.58■□□□□ 0.72
CD40-201ENST00000372276 DDX39AO00148 427 aaKnown RBP19.58■□□□□ 0.72
CD40-201ENST00000372276 STAM2O75886 525 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 CCND2P30279 289 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 EPC2Q52LR7 807 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 GJB7Q6PEY0 223 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 GSPT2Q8IYD1 628 aaKnown RBP19.58■□□□□ 0.72
CD40-201ENST00000372276 METTL13Q8N6R0 699 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 SPIRE2Q8WWL2 714 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 TEPSINQ96N21 525 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 RMDN3Q96TC7 470 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 PDCD2LQ9BRP1 358 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 GPR88Q9GZN0 384 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 TAOK3Q9H2K8 898 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 BCAS3Q9H6U6 928 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 RAVER2Q9HCJ3 691 aaKnown RBP19.58■□□□□ 0.72
CD40-201ENST00000372276 PXMP2Q9NR77 195 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 SMARCAL1Q9NZC9 954 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 HSPBP1Q9NZL4 362 aa19.58■□□□□ 0.72
CD40-201ENST00000372276 EMSYQ7Z589 1322 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 SHOX2O60902 331 aaPredicted RBP19.57■□□□□ 0.72
CD40-201ENST00000372276 TRIM49P0CI25 452 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 TRIM49CP0CI26 452 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 GZMAP12544 262 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 RPS6P62753 249 aaKnown RBP19.57■□□□□ 0.72
CD40-201ENST00000372276 PPATQ06203 517 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 ARHGEF16Q5VV41 709 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 LRIG3Q6UXM1 1119 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 GLYCTKQ8IVS8 523 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 CPXCR1Q8N123 301 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 NLGN2Q8NFZ4 835 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 SLC35G2Q8TBE7 412 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 TRERF1Q96PN7 1200 aa19.57■□□□□ 0.72
CD40-201ENST00000372276 GOLGA6L10A0A0M3HER8 536 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 BHMG1C9JSJ3 638 aaPredicted RBP19.56■□□□□ 0.72
CD40-201ENST00000372276 KRIT1O00522 736 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 ZBTB48P10074 688 aaPredicted RBP19.56■□□□□ 0.72
CD40-201ENST00000372276 RTP1P59025 263 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 MTMR3Q13615 1198 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 C11orf63Q6NUN7 778 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 SLC30A10Q6XR72 485 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 KSR1Q8IVT5 923 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 IQCKQ8N0W5 287 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 TMC2Q8TDI7 906 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 IFT81Q8WYA0 676 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 ATP6V0A1Q93050 837 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 TAAR1Q96RJ0 339 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 NTPCRQ9BSD7 190 aaKnown RBP19.56■□□□□ 0.72
CD40-201ENST00000372276 TSPYL1Q9H0U9 437 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 FAM114A2Q9NRY5 505 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 NFU1Q9UMS0 254 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 PACSIN2Q9UNF0 486 aaPredicted RBP19.56■□□□□ 0.72
CD40-201ENST00000372276 NOC2LQ9Y3T9 749 aaKnown RBP19.56■□□□□ 0.72
CD40-201ENST00000372276 PCDHA10Q9Y5I2 948 aa19.56■□□□□ 0.72
CD40-201ENST00000372276 ASTN2O75129 1339 aaPredicted RBP19.55■□□□□ 0.72
CD40-201ENST00000372276 RAD51CO43502 376 aa19.55■□□□□ 0.72
CD40-201ENST00000372276 VCAM1P19320 739 aa19.55■□□□□ 0.72
CD40-201ENST00000372276 HSPA9P38646 679 aaKnown RBP19.55■□□□□ 0.72
CD40-201ENST00000372276 CARSP49589 748 aaKnown RBP19.55■□□□□ 0.72
CD40-201ENST00000372276 MXI1P50539 228 aa19.55■□□□□ 0.72
CD40-201ENST00000372276 MFAP3P55082 362 aa19.55■□□□□ 0.72
CD40-201ENST00000372276 DMP1Q13316 513 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms