RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 SEC24CP53992 1094 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 HADHQ16836 314 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 MAP7D1Q3KQU3 841 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 C4orf50Q6ZRC1 276 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 RHPN2Q8IUC4 686 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 CPA5Q8WXQ8 436 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 CAPN6Q9Y6Q1 641 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 MAP1BP46821 2468 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 VAMP7P51809 220 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 SOX10P56693 466 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 GABPAQ06546 454 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 ACTN3Q08043 901 aaPredicted RBP9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 FOXD4Q12950 439 aaPredicted RBP9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 SCYL3Q8IZE3 742 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 EXOC4Q96A65 974 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 JPH2Q9BR39 696 aaPredicted RBP9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 ZMYND12Q9H0C1 365 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 FBXL5Q9UKA1 691 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 A0A087X0T9 212 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 ZSCAN5CA6NGD5 496 aaPredicted RBP9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 GOLGA8RI6L899 631 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 CLDN3O15551 220 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 SART1O43290 800 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 CSDE1O75534 798 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 FAM228BP0C875 321 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 GALCP54803 685 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 PSMC6P62333 389 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 TMEM62Q0P6H9 643 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 SEC23AQ15436 765 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 DALRD3Q5D0E6 543 aaKnown RBP9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 PDXDC1Q6P996 788 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 RFX8Q6ZV50 586 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 NEK9Q8TD19 979 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 KCNB2Q92953 911 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 IQCDQ96DY2 449 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 BTBD6Q96KE9 485 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 NBPF3Q9H094 633 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 IL17RBQ9NRM6 502 aa9.78□□□□□ -0.84
SMARCA1-202ENST00000371122 EXOC1LA0A1B0GW35 172 aa9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 DDTLA6NHG4 134 aaPredicted RBP9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 POLRMTO00411 1230 aaKnown RBP9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 UCHL3P15374 230 aa9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 QARSP47897 775 aaKnown RBP9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 PDE1BQ01064 536 aa9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 NYAP1Q6ZVC0 841 aa9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 ZFPM1Q8IX07 1006 aa9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 NUP85Q9BW27 656 aa9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 INTS2Q9H0H0 1204 aaKnown RBP9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 TMEM206Q9H813 350 aa9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 DMGDHQ9UI17 866 aaKnown RBP9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 NOC2LQ9Y3T9 749 aaKnown RBP9.77□□□□□ -0.84
SMARCA1-202ENST00000371122 GRAP2O75791 330 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 FGFR2P21802 821 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 CCDC62Q6P9F0 684 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 KCTD6Q8NC69 237 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 SREK1Q8WXA9 508 aaKnown RBP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 SPZ1Q9BXG8 430 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 MIS12Q9H081 205 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 SAYSD1Q9NPB0 183 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 STK24Q9Y6E0 443 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 NUP188Q5SRE5 1749 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 EIF3CLB5ME19 914 aaKnown RBP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 I3L4J1 428 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 EVI5O60447 810 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 RHOBTB3O94955 611 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 SRGNP10124 158 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 BMP6P22004 513 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 DPY19L2Q6NUT2 758 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 DARS2Q6PI48 645 aaKnown RBP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 CATSPER3Q86XQ3 398 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 GIMAP8Q8ND71 665 aaPredicted RBP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 LRRC8CQ8TDW0 803 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 CFAP36Q96G28 342 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 RSRC1Q96IZ7 334 aaKnown RBP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 C9orf72Q96LT7 481 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 EIF3CQ99613 913 aaKnown RBP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 TYW1Q9NV66 732 aaKnown RBP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 WDR70Q9NW82 654 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 DCTN4Q9UJW0 460 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 SNX12Q9UMY4 172 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 SSX2IPQ9Y2D8 614 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 ZRANB2O95218 330 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 CALRP27797 417 aaKnown RBP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 ORC1Q13415 861 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 BEND6Q5SZJ8 279 aaPredicted RBP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 ZC3H18Q86VM9 953 aaKnown RBP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 CCDC33Q8N5R6 958 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 PPFIBP2Q8ND30 876 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 OR6B3Q8NGW1 331 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 CFAP61Q8NHU2 1237 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 KLHL29Q96CT2 875 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 RPAP3Q9H6T3 665 aaPredicted RBP9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 HPSEQ9Y251 543 aa9.77□□□□□ -0.85
SMARCA1-202ENST00000371122 KCPQ6ZWJ8 1503 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 SPAG7O75391 227 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 MED24O75448 989 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 INHBAP08476 426 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 RWDD2BP57060 319 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 ERICH1Q86X53 443 aa9.76□□□□□ -0.85
SMARCA1-202ENST00000371122 SP8Q8IXZ3 490 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms