RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 EPS8L3Q8TE67 593 aaKnown RBP17.08■□□□□ 0.32
CLSTN1-201ENST00000361311 KAT2BQ92831 832 aa17.08■□□□□ 0.32
CLSTN1-201ENST00000361311 FAM217BQ9NTX9 383 aaPredicted RBP17.08■□□□□ 0.32
CLSTN1-201ENST00000361311 FAM47DPA6NHR8 397 aa17.08■□□□□ 0.32
CLSTN1-201ENST00000361311 PGM1P36871 562 aa17.08■□□□□ 0.32
CLSTN1-201ENST00000361311 PDIA5Q14554 519 aa17.08■□□□□ 0.32
CLSTN1-201ENST00000361311 NXNQ6DKJ4 435 aa17.08■□□□□ 0.32
CLSTN1-201ENST00000361311 FBXO25Q8TCJ0 367 aa17.08■□□□□ 0.32
CLSTN1-201ENST00000361311 POMGNT1Q8WZA1 660 aa17.08■□□□□ 0.32
CLSTN1-201ENST00000361311 ANO3Q9BYT9 981 aa17.08■□□□□ 0.32
CLSTN1-201ENST00000361311 COMMD10Q9Y6G5 202 aa17.08■□□□□ 0.32
CLSTN1-201ENST00000361311 RCCD1A6NED2 376 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 MYCLP12524 364 aaPredicted RBP17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 KCNJ1P48048 391 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 MKRN4PQ13434 485 aaPredicted RBP17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 PPP2R5DQ14738 602 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 ZYXQ15942 572 aaKnown RBP17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 EARS2Q5JPH6 523 aaKnown RBP17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 NACC1Q96RE7 527 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 CARD9Q9H257 536 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 TRIM49P0CI25 452 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 TRIM49CP0CI26 452 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 IZUMO3Q5VZ72 239 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 ATG16L1Q676U5 607 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 WDR59Q6PJI9 974 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 MORC4Q8TE76 937 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 ACCSQ96QU6 501 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 TEKT3Q9BXF9 490 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 SMYD3Q9H7B4 428 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 ARHGEF10LQ9HCE6 1279 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 USP17L5A8MUK1 530 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 ASAP2O43150 1006 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 CCDC22O60826 627 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 SHOX2O60902 331 aaPredicted RBP17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 TOM1L1O75674 476 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 STAM2O75886 525 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 XKR9Q5GH70 373 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 RBM26Q5T8P6 1007 aaKnown RBP17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 INTS2Q9H0H0 1204 aaKnown RBP17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 TMEM206Q9H813 350 aa17.07■□□□□ 0.32
CLSTN1-201ENST00000361311 H7C0C1 242 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 ATP5OP48047 213 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 PAPOLAP51003 745 aaKnown RBP17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 ITGB3BPQ13352 177 aaPredicted RBP17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 PIGOQ8TEQ8 1089 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 MIS12Q9H081 205 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 BAZ2BQ9UIF8 2168 aaKnown RBP17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 KIF20BQ96Q89 1820 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 GCLMP48507 274 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 GTF2IP78347 998 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 CRLF3Q8IUI8 442 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 SH3GL2Q99962 352 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 TRAIPQ9BWF2 469 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 PLA2G12BQ9BX93 195 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 HSD3B7Q9H2F3 369 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 SEMA6BQ9H3T3 888 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 SENP1Q9P0U3 644 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 REXO2Q9Y3B8 237 aaKnown RBP17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 MROH2AA6NES4 1674 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 ABCB11O95342 1321 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 RNF8O76064 485 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 TARSP26639 723 aaKnown RBP17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 ARL1P40616 181 aaPredicted RBP17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 EPHB1P54762 984 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 ESRRGP62508 458 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 MAPK7Q13164 816 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 CTTNQ14247 550 aaKnown RBP17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 NPHS2Q9NP85 383 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 COL15A1P39059 1388 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 CSF1RP07333 972 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 PBX1P40424 430 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 CENPPQ6IPU0 288 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 CD302Q8IX05 232 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 TATDN2Q93075 761 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 ADAM33Q9BZ11 813 aa17.06■□□□□ 0.32
CLSTN1-201ENST00000361311 SRRM3A6NNA2 597 aaPredicted RBP17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 RNF225M0QZC1 329 aaPredicted RBP17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 VHLP40337 213 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 PDE1BQ01064 536 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 TEKT1Q969V4 418 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 DHX36Q9H2U1 1008 aaKnown RBP17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 UBN1Q9NPG3 1134 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 PCDHB4Q9Y5E5 795 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 ALG6Q9Y672 507 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 COPEO14579 308 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 ITIH2P19823 946 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 DNAJC3Q13217 504 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 GEN1Q17RS7 908 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 RGS9BPQ6ZS82 235 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 TRIML2Q8N7C3 387 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 TSPYL2Q9H2G4 693 aaPredicted RBP17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 PDXKO00764 312 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 OPLAHO14841 1288 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 STK10O94804 968 aaKnown RBP17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 CDC25CP30307 473 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 C4orf33Q8N1A6 199 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 NPHP3-ACAD11A0A0J9YXS1 232 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 GOLGA8SH3BPF8 625 aa17.05■□□□□ 0.32
CLSTN1-201ENST00000361311 GOLGA8MH3BSY2 632 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms